Chryseobacterium sp. IHB B 17019: ATE47_12890
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Entry
ATE47_12890 CDS
T04193
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATE47_12890 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cih03019
]
ATE47_12890 (groEL)
03110 Chaperones and folding catalysts [BR:
cih03110
]
ATE47_12890 (groEL)
03029 Mitochondrial biogenesis [BR:
cih03029
]
ATE47_12890 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cih04147
]
ATE47_12890 (groEL)
Enzymes [BR:
cih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ATE47_12890 (groEL)
Messenger RNA biogenesis [BR:
cih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ATE47_12890 (groEL)
Chaperones and folding catalysts [BR:
cih03110
]
Heat shock proteins
HSP60 / Chaperonin
ATE47_12890 (groEL)
Mitochondrial biogenesis [BR:
cih03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ATE47_12890 (groEL)
Exosome [BR:
cih04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ATE47_12890 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
ATE47_12890 (groEL)
Exosomal proteins of breast cancer cells
ATE47_12890 (groEL)
Exosomal proteins of colorectal cancer cells
ATE47_12890 (groEL)
Exosomal proteins of bladder cancer cells
ATE47_12890 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
REF
Motif
Other DBs
NCBI-ProteinID:
ALR31362
LinkDB
All DBs
Position
2799540..2801165
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFDIESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVSVAKEIE
LEDRVENMGAQMVKEVASKTNDIAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KAVTAVVENLKAQSQAVGDSSEKIKQVASISANNDDTIGSLIAEAFGKVGKEGVITVEEA
KGTDTTVDVVEGMQFDRGYQSPYFVTNPEKMLAELENPYILLVEKKISSMKELLPVLEPI
AQGGKSLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEEQGFTMENISIDMLGTAEKIQIDKDNTTIVNGGGEESKIKGRVAQIKAQMETSTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFV
RAISALENLTGINPDETTGMKIVKRAIEEPLRQIVANAGGEGSVIVAKVAEGSGDFGYNA
KTDEYVNMFEAGIIDPTKVTRVALENAASVSGMLLTTECVITEVKKDEPAMPMGGGMPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaataaaattcgatattgaatcaagagacgctttaaaaagaggagttgat
gcattggctaatgcagtaaaagtaacattgggaccaaaaggtagaaatgttgtaatcgaa
aaatctttcggtgcacctcacgtaacgaaagacggtgtttctgtagcgaaagaaatcgaa
cttgaagacagagtagaaaacatgggagcacagatggtaaaagaagtggcttccaaaact
aatgatatcgcaggagacggtactactaccgctactgttttggctcaggctatcgtaaga
gaaggtcttaaaaacgtagctgcaggagcaaatccaatggatcttaaaagaggaatcgac
aaggcggtaactgcagttgttgaaaaccttaaagctcaatctcaggctgttggagattct
tcagaaaaaatcaagcaggtagcttctatttctgctaacaacgatgatactatcggttct
ttgatcgctgaggcgtttgggaaagttggtaaagaaggagttatcacggtagaagaagcg
aaaggtactgacacaacggtagatgttgtagaaggtatgcagttcgacagagggtaccag
tcgccatatttcgtgacaaaccctgagaaaatgttggctgagcttgaaaatccatatatc
cttctagtagagaaaaaaatctcttcaatgaaagaattacttcctgttcttgagccaatc
gctcagggaggtaagtcattattaatcatctctgaagaagttgaaggtgaagctttggct
actttagtggtaaacaaattaagaggttctcttaaaattgctgctgtaaaagctccagga
tttggggacagaagaaaagcaatgctggaagatatcgcgatcttaactggaggtcaggtt
atctctgaagagcaaggtttcacaatggaaaacatctctatcgatatgttgggaactgct
gaaaaaattcagatcgacaaagacaacacaacaatcgtaaacggtggtggtgaagaaagc
aaaatcaaaggcagagttgctcagatcaaagctcagatggaaacttccacttctgactat
gataaagaaaagcttcaggaaagattggctaaattagccggaggtgttgccgtactttac
gtaggtgcagcttctgaagttgaaatgaaggagaaaaaagacagagttgacgatgcatta
cacgctacaagagcggctgtagaagaaggtatcgttgctggtggtggtgttgccttcgta
agagcgatctctgctttagaaaaccttacaggaattaatcctgacgaaactacaggtatg
aaaatcgtgaaaagagcaatcgaggagccattaagacaaatcgttgccaacgctggtggt
gaaggttctgtaatcgttgctaaagtagcggaaggaagcggagacttcggatacaacgca
aaaactgacgagtatgtaaacatgtttgaagcagggatcatcgacccaacaaaagtaaca
agagttgcccttgaaaatgcagcttctgtttcaggaatgcttcttacaacggaatgtgta
atcactgaagtgaaaaaagacgaaccagctatgccaatgggtggtggaatgccaggaatg
atgtaa
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