Chryseobacterium sp. IHB B 17019: ATE47_13880
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Entry
ATE47_13880 CDS
T04193
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATE47_13880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_13880
Enzymes [BR:
cih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
ATE47_13880
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATE47_13880
RecFOR pathway proteins
ATE47_13880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
ALR31538
LinkDB
All DBs
Position
3016586..3017140
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AA seq
184 aa
AA seq
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MIAEKIILGIDPGTTIMGFGIISVKKGKMEMISIHELLLKKYPNHETKLKYIFDKTLALI
DEFHPDEVALEAPFYGKNVQSMLKLGRAQGVAMAASLHRNIPITEYSPKKIKMAITGNGN
ASKEQVAGMLQNLLNLKEFPTKYLDASDGLAVAVCHHFNSGTIADTKSYTGWESFLKQNP
DRLK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagagaaaattattttaggaattgacccaggaactacgataatgggttttgga
attatttcggtaaaaaaaggaaaaatggaaatgatttccatccatgaattattgctgaaa
aaatatcccaatcacgaaactaaacttaaatatatttttgataaaaccttagctttaatt
gacgaatttcaccctgatgaagtggctttggaagctcctttttacggaaaaaatgttcaa
agtatgctaaaattgggacgtgcacagggtgttgcaatggctgcaagccttcacagaaat
attcccattactgagtactctccgaaaaaaataaaaatggcgattacaggcaatggaaat
gcgagcaaagaacaggtggcgggaatgcttcaaaatcttttaaatcttaaagaatttccc
acaaaatatcttgatgcttccgatggcttggcggttgcagtctgccatcacttcaattcc
ggaacaattgctgatacgaaatcttataccggctgggaaagttttctaaaacaaaatcct
gatcgtttgaaataa
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