Chryseobacterium sp. IHB B 17019: ATE47_16695
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Entry
ATE47_16695 CDS
T04193
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
cih
Chryseobacterium sp. IHB B 17019
Pathway
cih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ATE47_16695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_16695
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ATE47_16695
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_27
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ALR32055
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Position
complement(3616626..3619214)
Genome browser
AA seq
862 aa
AA seq
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MAKATKKETPLMTQYNTIKAKYPDALLLFRVGDFYETFGQDAIKTSQILGIVLTKRANGE
GHIELAGFPHHSVDSYLPKLVRAGMRVAICDQLEDPKTVKGIVKRGVTELVTPGVTFNDQ
VLNSKKNNFLLSLHKEKEKFGIALVDISTGEFLVSEGNLEKLLHIVGTFDPSEIIYQRSV
QLPEQLKNKSAFKLEDWAYQYNFAYEKLTNHFKTNSLKGFGVENQPLAITAAGAIFAYLV
EDTHHNLLSHITKLQVIPQEDYLMMDNFTLRNLEIVYPSNPQGKSLLDIIDKTSTPMGGR
LLRRRIILPLKSVNEINRRLSLIDFLNENDHLKYEICQLLKSISDLDRLMGKLAAEKISP
KELGYLRQSLINIHTIKALLHPHADVLAWLEPLYDQDELIKCLQNHLNDELPVNLAKGNV
IKEGISEELDRLRGLQSKGRGFLDEMCQREIERTGITSLKIDFNNVFGYFIEVRNTHKDK
VPSDWVRKQTLVNAERYITEELKEYENQILGAEEKIGVLENELYRNVCSETMIYIDQIQE
NSNIIAQLDVAVGLSELAVSESYTKPVLNESFAIDLKEARHPIIENALPLGEKYIPNDIF
LDKDTQQIIMVTGPNMAGKSAILRQTAIVCLMAQIGSFVPAKHAEIGILDKIFTRVGATD
NISAGESTFMVEMNEAANILNNISERSLILLDEIGRGTSTYDGVSIAWAIAEYLHQHPTQ
AKTLFATHYHELNEMTVNFERVKNFHVSIQENKGNIIFLRKLIPGGSEHSFGIHVAKLAG
MPSKVVNRANEILKTLEASRAQSGSSESIKRVTEENMQLSFFQLDDPVLENIREELTKID
INTLTPIEALMKLNSIKKMIGG
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcgacgaagaaagagaccccgttaatgacgcagtacaataccatcaaggcg
aaatacccggatgcacttttactattcagggtgggagatttttatgaaacttttgggcag
gatgcaattaaaacatcacagattttaggaattgtccttacgaaaagagcgaatggggaa
gggcacatcgaattagctggatttccgcaccactccgtagattcttacttgccaaaactg
gtaagagcaggaatgagagttgccatttgtgaccaattggaagatccaaaaactgttaaa
ggaattgtaaaaagaggagtgacagaattggtgacccccggagttaccttcaatgaccag
gtcttaaattcaaaaaagaataatttccttctttcgcttcataaggaaaaagagaaattc
gggattgctctggtggatatttctacgggagaattcctggtgagtgaagggaatttggaa
aaattgcttcacatcgtcggtacttttgatccgagtgaaattatttaccagagaagtgtt
cagcttccggagcagcttaaaaataaaagtgctttcaagctcgaagactgggcatatcaa
tacaattttgcctacgaaaaacttacgaatcattttaaaaccaattccttaaaaggtttc
ggagttgaaaaccaaccgttagcgattaccgcagcgggagctatttttgcttatttagtt
gaggacacgcatcataatttactttcacacatcaccaagcttcaggtgattccgcaggaa
gattatctgatgatggataattttaccttgagaaaccttgaaatcgtctatccaagcaat
ccacagggaaaatctttattggatattatcgataaaacttctactccaatgggcggaaga
ttgttgaggagaagaattattttacctttaaaatccgtcaatgaaatcaacagaagactt
tctttgattgattttttaaacgaaaacgatcatcttaaatatgaaatctgccagttatta
aaatccatttcggatttagatcgattgatgggaaaactggcggcagaaaagatctcaccg
aaagaattaggttatctccgtcagagcttaattaatattcatacaattaaggccctacta
catcctcacgccgatgttttggcttggcttgagcctttatatgatcaggatgaactgata
aaatgtcttcaaaaccatttgaacgatgaacttcctgtaaatcttgcaaaaggaaatgta
attaaagaaggaatttctgaagagctggacagattgagaggacttcagtctaaaggccgt
ggcttcctggacgaaatgtgtcagagggaaatcgaaagaacaggaatcacaagtcttaaa
attgattttaataatgttttcggatatttcattgaagttcgaaatacgcataaagacaaa
gttccgagtgactgggtgagaaaacaaacccttgtaaatgcagaaagatacattaccgag
gagctgaaagaatatgaaaaccagattcttggagcggaagaaaaaataggagttttagaa
aacgaactgtacagaaatgtctgttctgaaacgatgatttatattgaccagattcaggaa
aattcaaatattattgcgcagcttgatgttgcagtcgggttatcggaactcgctgtttct
gaaagctatacgaaaccggttttaaacgaaagttttgcgatcgatttaaaagaagccagg
cacccgatcatagaaaatgcacttccgctaggagaaaaatatatcccgaatgatattttc
ttagataaagatactcaacagattatcatggttaccggaccgaacatggcgggtaaatct
gctattcttcggcagaccgcaattgtttgtttaatggctcagatcggaagctttgtgccc
gcaaaacatgcggaaatcgggattttagataaaatttttacaagagtaggagccacggat
aatatttctgccggtgaatcaactttcatggtagaaatgaatgaagcggcgaatatttta
aataatatttcagaaagaagcttaattctattagacgaaataggccgtggaacttccacc
tacgacggtgtttctattgcctgggcgatcgcagaatatcttcaccagcatccaactcaa
gcgaaaacattattcgcaacccactatcacgagcttaacgaaatgacagtgaattttgag
cgtgtgaaaaacttccacgtttccattcaggagaataagggaaatattatctttttaaga
aaattaattcccggaggaagtgagcacagtttcggtattcatgtggcaaaattggctgga
atgccttcaaaagtggtcaacagagccaatgaaattcttaaaacgctagaagcaagccga
gctcagagcggttcctccgaaagcatcaaaagagttaccgaagaaaatatgcagttgtct
ttcttccagttggatgatcctgttttggaaaatattcgtgaagaattgacaaaaattgat
atcaataccttgacgccgatagaagctttaatgaagctgaattctattaaaaaaatgatt
ggtggataa
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