Chryseobacterium sp. IHB B 17019: ATE47_18625
Help
Entry
ATE47_18625 CDS
T04193
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cih
Chryseobacterium sp. IHB B 17019
Brite
KEGG Orthology (KO) [BR:
cih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cih03032
]
ATE47_18625
03400 DNA repair and recombination proteins [BR:
cih03400
]
ATE47_18625
Enzymes [BR:
cih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ATE47_18625
DNA replication proteins [BR:
cih03032
]
Prokaryotic type
DNA Topoisomerases
ATE47_18625
DNA repair and recombination proteins [BR:
cih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATE47_18625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
ALR32405
LinkDB
All DBs
Position
4030809..4033367
Genome browser
AA seq
852 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFDVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKAAVKKAEMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFVPKASFKLDGIFLNKSEQEIAAKLKKDFEKEEDAEKFLELAKTTEFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGHITYMRTDSVNLSQEAIEGAK
KQIIGEYGPEYSSPRNYTTKSASAQEAHEAIRPTDFSVKTIGDAQLSKLYQLIYRRTLAS
QMANAKIEKTVIEIGNAKLPHNFEAQGEVIIFDGFLKAYGIVKTEEDDEENNEKLLPKVS
VGEVLDYKKIIATEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPQTREVVKMSLTKDKIKKEVLEEKFGGDKNKFVPTDTGEVVSDFLTDNFKEILDYGFT
ARVEESFDEIANGAQKWKEMMTDFYSKFHPRIEDVEENADRATGDRLLGLDPKTGKNVHA
RIGRFGAMIQIGETDDEEKPVFASLMSGQNIATITLDEALELFKLPFDLNEFDGQPVSVG
VGRFGPYVKWGETFISIPKGEDPLSVDQKRAEEIINEKKKADAPIATYKGEPVTKGSGRF
GPFIKYKDIFINVPKRYNFDNLSQSDINELIDAKLEKEANRYIQQWEKEKISIENGRWGP
FVKFGKAMFKIPKKKDDIKYDAEELKDVSLDEVKKWITDQDPKAFAEKKKPAAKKATTKK
ATTTKKAVAKKK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtcgaatcaccggcaaaagcaaaaactattcagaaatac
ttagggaaggatttcgatgtgaaatccagtttcgggcacatccgggatttacctaaaaag
gggatggggattgatcttgccacattcagcccggattacgaagtttcggcggataaaaag
aaattggtaacagaattgaaagctgccgtaaaaaaagccgaaatggtttggctggcttcc
gatgaagaccgcgaaggggaagcaattgcatggcatttagctgatgaattaaaattaaag
ccggaaaatagaaaaagaattgtttttcacgagattactaaaaatgccattctaaaagcg
attgaaaacccaagagatattgatcaaaacttagtaaatgcacaacaggcaagaagggtt
ctggacagaatcgtaggttttgaaatgtctccggtgctctggaaaaaagtaaaaccggga
ttatcagcaggaagagtacagtcggttgccgtaagattgattgttgaaagggaaaaagaa
atccgtgaatttgttccgaaagcaagttttaagcttgacggaattttcctaaacaaatcc
gaacaggaaattgccgctaaacttaaaaaagacttcgaaaaagaagaagacgcggaaaaa
ttcttagaattagcaaaaactactgaattcaaagttcttaatgttgaaacaaaacccgga
acacgttctgcatcagctccttttacaacttctacgttacaacaggaggcttcttcaaga
ttaggatataatgttaccaacaccatgcgtcttgcccaaaggttatatgaagaaggacac
attacctatatgagaaccgactcggtaaacctttctcaggaagctattgaaggtgcaaaa
aaacaaattatcggggagtacggcccagaatattcttcaccaagaaattacactacaaaa
tccgcatcagctcaggaagcccacgaagccatccgtccgacagatttttctgtaaaaaca
attggtgatgctcaattaagcaaattatatcaattaatatacagaagaacactggcttcc
cagatggcaaatgccaaaattgaaaaaacagtgatcgaaatcggtaacgcaaaactgcct
cacaattttgaagcgcaaggtgaagttatcatttttgatggtttcttaaaagcttacgga
atcgttaaaaccgaagaggatgatgaagaaaacaatgaaaaattacttccaaaagtaagc
gttggagaagttttagattataaaaaaattatagcaacagaaaaattcacaaggccaagt
gcaagatatacggaagccggactggtaagaaagctggaagaattgggaatcggacgtccg
tctacgtatgcgccgaccatccagacaatccagaaccgtgaatatgttgacaaaagagag
attgaaccgcagactcgtgaggtggtgaaaatgtctttaacaaaagataaaatcaaaaaa
gaagtccttgaagaaaaattcggaggggataaaaataaatttgttccaacggataccggt
gaggtggtaagtgatttcttaacagataattttaaagaaatcctggattacggctttaca
gcaagagttgaggaaagttttgacgaaattgcaaacggtgctcagaagtggaaagaaatg
atgaccgatttctactcaaaattccatccgagaattgaagacgtagaagaaaatgcagac
agggcaactggagacagacttttaggactcgatccgaaaacgggtaaaaatgtccacgcc
agaatcggaaggttcggtgccatgattcagatcggggaaacggatgatgaggaaaaaccg
gtttttgcttcattgatgtctggtcagaatattgcaacaatcacccttgatgaggctttg
gaactatttaagttaccttttgatttaaatgaatttgatggacagcctgtttctgtgggg
gtcggaagattcggaccttacgtgaaatggggagaaacattcatcagcattccgaaaggt
gaagatccgctttctgttgaccagaaacgtgctgaagaaatcatcaatgaaaagaaaaaa
gcagacgccccgattgcaacgtacaaaggcgaacctgtaacaaaaggttccggaagattc
gggcctttcattaagtataaagatattttcatcaacgttccgaagagatataattttgat
aatctttctcaaagcgacatcaatgaattaattgatgctaagctcgaaaaggaagcaaac
cgatatatccagcagtgggaaaaagaaaaaatttccattgaaaacggaagatggggtcct
tttgttaaattcggaaaagcaatgtttaaaatcccgaagaaaaaggatgatataaaatac
gacgccgaagaattgaaagatgtttctttggatgaggtgaaaaaatggatcacagatcag
gatcctaaagcctttgctgagaaaaagaaaccggccgcgaaaaaagcaacgactaaaaag
gcaacaacaacgaagaaagcagttgctaaaaagaaataa
DBGET
integrated database retrieval system
