Corynebacterium ihumii: CIHUM_03970
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Entry
CIHUM_03970 CDS
T09115
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cihu
Corynebacterium ihumii
Brite
KEGG Orthology (KO) [BR:
cihu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cihu03400
]
CIHUM_03970 (phrB)
Enzymes [BR:
cihu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CIHUM_03970 (phrB)
DNA repair and recombination proteins [BR:
cihu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CIHUM_03970 (phrB)
Prokaryotic type
CIHUM_03970 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WCZ34227
UniProt:
A0ABY7UE09
LinkDB
All DBs
Position
complement(792018..793391)
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AA seq
457 aa
AA seq
DB search
MPTTLVWFRDDLRVTDNPALSWAVSRGEVAGVLIDDTSGGTRPLGRAAAWWRERSVASLS
TKLPIIYEQGDPREIVPRLVTELGAEVVWNRRYDAIDLDAEVKRAVDARTFPGFLLAEPW
EINTGDGTPYRVFTPFYKAVQQHLVAHPPQPVAVPVLPGGTRLEVPEAPAWAAGLAAHNT
PGEDAALSRFHEFLDGLVDGRGYDNNDLAAGATSGLSAHLRFGELSPGYVWAETAAFAEA
HPAAASHAWAFLRQLVWREFAWYRLYHLPDLAVRNVRSQFDGFEWAWSGNAAPWEHAQAF
ADPAMEPDLDAAQHLDQLARWQRGETGMPLVDAGMRELWETGTMHNRVRMVAGSWLTKNL
GIHWRHGEEWFWDTLVDADAASNPFNWQWVSGSGDDAAPYFRVFNPLTQQEKFDPAGAYV
SRWAPEALLPGYPEPMVDVKESRKTALAAYSDIKGNR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaccactcttgtttggttccgcgacgatctgcgcgtcacggacaaccccgcgctt
tcgtgggccgtatcgcgcggggaggttgcgggtgtgcttatcgacgacacctccggcggc
acccgccccttaggccgcgccgccgcgtggtggcgcgaacgcagtgttgcgtcgttaagc
acgaagctccccatcatctacgagcagggcgacccccgcgagatcgtcccgcgcctggtc
acagagctcggtgctgaggtggtgtggaaccgccgctacgatgcgattgacttggacgcg
gaggtcaagcgcgcggtggacgcgcgcacgttcccggggtttttgctcgcggagccgtgg
gagatcaataccggcgacggcaccccgtaccgggtgttcacgccgttttataaggccgtg
cagcagcacctggtcgcgcacccgccgcagccggtggcggtgccggtactacccggcggc
acgcggctggaggttccggaggcaccggcgtgggccgctggcttggccgcgcacaacacc
cctggcgaggacgcggccctttcgcgcttccacgaatttttggacgggctggtagatggg
cgcggctacgacaacaacgacctggccgccggcgcgacctcggggctgagcgcacacctg
cgcttcggagagctctcccccggttacgtctgggcggaaacggcagcgtttgcggaggcg
cacccggccgccgcgagtcacgcgtgggcgtttttgcgccagctggtgtggcgcgagttt
gcctggtaccgcttgtaccacctgccggatctggcggtgcgcaatgtacgcagccagttc
gacggcttcgagtgggcgtggagcggcaacgccgcaccgtgggagcacgcgcaggcgttt
gcggatcctgccatggaaccggatcttgacgccgcgcagcacctggaccagctagcgcgg
tggcagcggggtgaaacaggcatgccgctggtggatgccggcatgcgcgagctgtgggaa
accggcaccatgcataatcgcgtacgcatggtcgcgggctcctggctgaccaagaatctg
ggcattcactggcgccacggggaggagtggttctgggacacgctcgtcgacgccgacgcc
gcctccaacccgttcaactggcagtgggtgtccggctccggcgacgatgccgcgccgtac
ttccgcgtcttcaacccgctaacgcagcaggagaagttcgaccccgccggcgcgtacgtt
tcgcggtgggcgccggaggcgctgctgcctggctatccggagccgatggtcgacgtcaag
gaatcccgaaagaccgcgctcgcggcgtacagcgacatcaaaggcaaccggtag
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