Corynebacterium ihumii: CIHUM_04670
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Entry
CIHUM_04670 CDS
T09115
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
cihu
Corynebacterium ihumii
Pathway
cihu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cihu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIHUM_04670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cihu03021
]
CIHUM_04670
03019 Messenger RNA biogenesis [BR:
cihu03019
]
CIHUM_04670
Transcription machinery [BR:
cihu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CIHUM_04670
Messenger RNA biogenesis [BR:
cihu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CIHUM_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
S1CSD-TOTE-2
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
WCZ34364
UniProt:
A0ABY7UEQ5
LinkDB
All DBs
Position
936294..938072
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AA seq
592 aa
AA seq
DB search
MTETGTAADLAAMKIPELRKLAAEKGLKGISGLRKGELIQAIVTGQVPRKAAAEKAAPAE
KAAPEQAEKPSQAEKQQLSDDDESRGASRSAARRARRNRARSQHDEQQGGDNRDNRDNRD
NRGNNAEGDHEQNHDNNDRGNDRGGRNNHGNHGNHGGNNDDHHHGGGRRGRRGRRNRNRN
RDHNHGGGNNGNNDNQNFNPEDLQEVAGIVDVQDNGSAFIRTTGYRQSNADVYVPHKLVR
QSGLRSGDAVTGQVRANGQSHSQGNGRNRRSYNQVVRVDSINGQTTEAAKGRKEFHKLTP
LYPNRRLRLETEPKILTTRVIDLVMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNPE
CYLMVVLVDERPEEVTDMQRSVNGEVIASTFDRPPSEHTAVAELAIERAKRLVEMGQDVV
VLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIEEGGSLTIIATAMV
ETGSAGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLMSPEEARVMH
KLRRILSALDPQQSIDMLIKQLKKTKTNGEFLIGVANSAPMAQTENDEEDYS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccggcaccgcggccgacctcgccgcaatgaagattccggagctgcgaaag
ctcgccgccgaaaagggacttaaggggatctccgggctccgcaagggggaactcatccag
gccatcgtcaccgggcaggtgccacgcaaggccgccgccgagaaggcagcgccggcggaa
aaggcagcgccggagcaggccgagaagccgagccaggcagagaagcagcagcttagcgac
gacgacgagtcccgcggggcatcgcgctccgccgcacgtcgcgcccgccgcaaccgtgca
cgctcgcagcacgacgagcagcagggcggcgacaaccgtgacaaccgtgacaaccgtgac
aaccgtggtaacaacgccgagggcgatcacgagcagaaccacgacaacaacgaccgtggc
aacgaccggggcggccgcaacaaccacggcaaccacggcaaccatggcggcaacaacgac
gaccaccaccacggtgggggccgccgcggccgtcgcggtcgtcgcaaccgtaaccgcaac
cgggaccacaaccacggcggcggaaacaacggcaacaacgacaaccagaacttcaacccg
gaggacctgcaggaggtcgccggtatcgtggacgtgcaggacaacggttcggcgttcatc
cgcactaccggctaccgccagtccaacgcggacgtctatgtgccgcataagctcgtgcgc
cagtcgggcctgcgctccggcgacgcggtgacgggtcaggtccgcgcgaacgggcagtcc
cactcgcagggcaacggccgtaaccgtcgcagctacaaccaggtagtgcgggtcgattcc
atcaacggccagaccacggaggcggcgaagggccgcaaggagtttcacaaactcactccg
ctgtacccgaaccgccgtctgcgcctggaaactgagccgaagatcctcaccacccgcgtg
atcgacctggtcatgccgattggtaagggccagcgcgcgctgatcgtctccccgccgaag
gccggtaagacgacgattctgcagaacatcgccaacgcgatcgccaccaacaacccggag
tgctacctcatggtggtgctggtggacgagcgtccggaggaggtcacggacatgcagcga
agcgtcaacggcgaggtcattgcctccacgttcgaccgtccgccgtcagagcacaccgcc
gtggccgagcttgccatcgagcgcgcgaagcgcctggtggagatgggtcaggacgtggtg
gtcctgctggattccatcacccgcctgggccgtgcctacaacaactcctcgccggcgtcc
ggccgcatcctttccggtggtgtggattccaacgcgctgtacccgccgaagcgcttcctg
ggcgcagctcgcaacatcgaggagggcggttcgctgacgattatcgccaccgcgatggtg
gagaccggctcggctggcgacaccgtgatcttcgaggagttcaagggcaccggcaacgcg
gagctgaagctggaccgcaagatcgcggagcgtcgcgtgttcccggctgtggacgtcaac
ccctccggcacccgcaaggacgagctgctgatgagcccggaggaggcgcgcgtgatgcac
aagctgcgccgcatcctctccgcgctggacccgcagcaatccattgacatgctgattaag
cagttgaagaagacgaagaccaacggcgagttcctgatcggcgtggccaactctgcaccg
atggcgcagacggaaaacgacgaggaggactactcctaa
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