Corynebacterium ihumii: CIHUM_05220
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Entry
CIHUM_05220 CDS
T09115
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cihu
Corynebacterium ihumii
Pathway
cihu03030
DNA replication
cihu03410
Base excision repair
cihu03420
Nucleotide excision repair
cihu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cihu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIHUM_05220 (polA)
03410 Base excision repair
CIHUM_05220 (polA)
03420 Nucleotide excision repair
CIHUM_05220 (polA)
03440 Homologous recombination
CIHUM_05220 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cihu03032
]
CIHUM_05220 (polA)
03400 DNA repair and recombination proteins [BR:
cihu03400
]
CIHUM_05220 (polA)
Enzymes [BR:
cihu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIHUM_05220 (polA)
DNA replication proteins [BR:
cihu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CIHUM_05220 (polA)
DNA repair and recombination proteins [BR:
cihu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CIHUM_05220 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIHUM_05220 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
Nsp1_C
Motif
Other DBs
NCBI-ProteinID:
WCZ34470
LinkDB
All DBs
Position
1048518..1051175
Genome browser
AA seq
885 aa
AA seq
DB search
MSDTPENTKRLLLIDGHSMAFRAFYALPAENFSTSGGQHTNAVYGFLSMFANILADEKPT
HAAVVFDVGRKTFRTERFPEYKAQREAAPPEFKGQVPIIEDVLDDLGITTLSKENFEADD
IVATLVTQARAEGDFEIVLVSGDRDYIQLVDGTTTLMYPTRGVSTMTRFTPEEVENKYGL
TPAQYPDFAALRGDPSDNLPSVPKVGEKTATKWITQYGSLEGLIESADELKGVAANNFRE
RIDQVRLNRELTQMVTDVELPVAPNDLELKPADVTQVAARFDDLEFGVNLRERVLAAVPT
DGTAPETEAVELEDVTIDDEPLDTWLSSRQDDGLAVYVSGNATPGQGDVVALAIVDKQRH
GVSKLAADLSAAEDAAVKQWLESDAPKYMHEAKAAYHMLRGRGIELAGIAHDTAIAAYLL
RPGQRTYALEDIYQRHLQRQLNVGSDQMSLLGDTADVDAAAAILELSAELTKELREIDSY
ELYADLELPLVTVLAEMEHTGIAVDLDVLENQRKELTLKVEQIEQEARQLVDEPSLNLSS
PKQLSAVLFDKLELPKTKKTKTGYSTAAGEIEALAEKNPHPFLDHLLAHREHQKLKSTIE
GLIKTVQPDERIHTTFNQTVASTGRLSSAEPNLQNIPVRTEAGRVIRSAFVVGEGYECLL
TADYSQIEMRVMAHLSQDEGLIEAYRAGEDLHNFVGSRVFDVPIDQVTPELRRRVKAMSY
GLVYGLSAYGLSNQLSISAGEAKDIMASYFERFGGVKRYLDEVVEQARRDGYTSTVFGRR
RYLPELNSDNRVARENAERAALNAPIQGTAADIIKVAMLRVDAALEGKKSRVLLQVHDEL
VVEIAPGELDEVREILEREMDGAIELLVPLEVSAGMGANWDAAAH
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatacacccgagaacacgaagcgactgttgcttatcgacggccactcgatggcc
ttccgcgccttttacgcgctgcccgcggagaacttctccacctcgggcggccagcacacg
aacgcggtctacgggtttctatccatgttcgccaacatcctggcggacgagaagccgacg
cacgccgccgtcgtcttcgatgtgggccgtaagacgttccgcacggagcgtttcccggag
tacaaggcgcagcgcgaggccgcgccgccggagttcaaaggccaggtgccgatcatcgag
gacgtgctggacgacctcggcatcaccaccttgagcaaggagaacttcgaggcggacgac
atcgtcgccacgctggtgacccaggcccgtgccgagggcgacttcgagatcgtgctggtc
agcggcgaccgtgactacatccagcttgtggacggcaccaccacgctgatgtatcccacc
cgcggcgtgtccaccatgacccggtttacgcccgaggaagtggagaacaagtacgggctg
acacctgcgcagtacccggacttcgcggcgctgcgcggggatccgtcggacaacctgccc
agcgtgccgaaagtgggggagaagaccgccaccaagtggatcacgcagtacggcagcctg
gaagggctcatcgaaagcgccgatgagctcaagggcgtcgccgccaacaacttccgtgag
cgcatcgaccaggtgcgcctcaaccgcgagctcacgcagatggttaccgacgttgagctg
ccggtcgccccgaacgatctggagctcaagcctgcggacgtcacccaagtcgccgcccgc
ttcgacgacctcgaattcggcgttaatctccgcgagcgcgtcctcgccgccgttcctacc
gacggcaccgcgcccgagacagaagccgtcgaacttgaagacgtcactatcgacgacgaa
ccgctggacacctggctcagtagccgtcaggacgacggtcttgccgtctacgtctctggc
aatgccacgcccggacagggcgatgtggtggcgctggcgatcgtcgataagcaaaggcac
ggtgtgtccaagctcgccgcagacttgagtgccgcggaggacgccgcggtgaagcagtgg
ctcgagtcggacgcgccgaagtacatgcacgaggcgaaggccgcctaccacatgctgcgc
ggccgcggcatcgagctcgccggcatcgcgcacgacaccgcgattgccgcctacctgctg
cgacccggccagcgcacctacgctctggaggacatctaccagcgccacctgcagcgccag
ctcaacgtcggctcggaccagatgagcctgctcggcgatactgcggacgtggatgcggcc
gctgcgatcctggagctgtcagcggagctgacgaaggagctgcgcgagatcgactcctac
gagctctacgcggacctggagctgccgcttgtcaccgtgcttgcggaaatggagcacacc
ggcatcgcggtggatctggacgtgctggaaaaccagcgcaaggagctcacgctgaaggtg
gagcagattgaacaggaggcgcgccagcttgtggacgagccgtcgctgaacctgtcttcg
ccgaagcagctgtccgcagtgctctttgacaaactcgagctgccgaagacgaagaaaacc
aagactgggtattcgacggccgcgggtgaaatcgaggcgctggcggagaagaacccgcac
ccgtttttggaccacctgctggcgcaccgcgagcaccaaaaactcaagtccaccatcgag
ggcctgattaaaacggtgcagccggacgagcgcatccacaccacgttcaaccagaccgtg
gcgtccacaggccgcttaagctccgcggagccgaacttgcagaacatcccggtgcgcact
gaagccggccgcgtcatccgctccgcgttcgtggtgggcgagggctacgagtgcctgctc
acggcggactactcgcagattgagatgcgcgtgatggcgcacttaagccaggacgagggg
ctgattgaggcctaccgcgcaggggaggacctgcacaactttgtgggctcgcgcgttttc
gatgtgcccatcgaccaggtcaccccggagctgcgtcgccgcgtcaaagcgatgtcctac
gggctggtctacggactgtcggcgtacgggttgtccaaccagttgtctatctccgccggc
gaggcgaaagacattatggccagctacttcgagcgcttcggtggagtgaagcgctacctg
gatgaggtggtggagcaggcgcgtcgcgacggctacacgtccaccgtgttcggccgccgc
cgctacctgccggagctgaatagcgataaccgggtcgcgcgcgagaacgcagagcgcgcc
gccttgaacgcgccgatccagggcacggccgcggacatcatcaaggtggccatgctgcgt
gtggacgcggcgttggaaggcaagaagtcccgcgtgctgctgcaagtccacgacgagctt
gttgtcgagatcgccccgggcgagctggacgaggtccgcgagatcctcgagcgggagatg
gacggcgctatcgagctgctcgttccgttggaggtctccgctggcatgggcgccaactgg
gacgcggccgcgcactag
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