Corynebacterium ihumii: CIHUM_06470
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Entry
CIHUM_06470 CDS
T09115
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cihu
Corynebacterium ihumii
Brite
KEGG Orthology (KO) [BR:
cihu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cihu03016
]
CIHUM_06470 (rnd)
Enzymes [BR:
cihu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CIHUM_06470 (rnd)
Transfer RNA biogenesis [BR:
cihu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CIHUM_06470 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WCZ34708
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All DBs
Position
1309776..1310981
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AA seq
401 aa
AA seq
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MSARLDYRLVDTPAAFREAAGALAHGRGPFAVDTERASSFRYGNRAFLVQVARRGAGTFL
IAPEGHRDEVREIFAPVLGGQEWIIHAAGEDLRSLALLGLHPGILFDTELASRIVGHDRP
NLAAMVERFVGVELEKGHGHEDWSRTPLPKSWQDYAALDVEYLHELAEALTEVLDAQGKL
HWAFEEFAHLIAVYSKTPYPEKTWRDMKGLASVRDQSGLQVARELWHAREEISEQRDIAP
GRLLPNRALLAIALAEPDSPHGLTRAIGGKGMPSRDVRRWLGVVERALSADPATWPRRRD
PRENGTPSKSGWERHYPESWQMLQLCREDIAASAEDLDIRPDILLTPAILRETVWNAPDK
APAWDTHQAATALEKAGARPWQIQITAPILAAAHAEMLDLV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccggctggactaccgccttgtagatacgcccgccgcctttcgtgaggctgcg
ggcgcgctcgcgcacggtcgcggaccgttcgccgtggacactgaacgcgcttcttccttc
cgctacggcaaccgcgcatttcttgtgcaagtagcgcgacgtggcgcaggaacgtttctg
atagcgcccgaaggccaccgcgacgaggtgcgcgagatcttcgcccccgtgctaggtgga
caagaatggatcatccacgccgcgggagaagacctgcgcagccttgcactgctcggcttg
caccccggcatccttttcgacaccgagctggcatcacggatcgtcggccacgaccgcccc
aacctcgccgccatggtcgaacgtttcgtcggtgtggagctggagaaaggccacggccac
gaggattggtcgcgcacgccgctgccaaagtcgtggcaagactacgccgcactcgacgtg
gaatatctccacgagctggcagaagcgctcacggaagtcctcgacgctcagggcaaactg
cattgggcattcgaggagttcgcgcacctgatcgccgtatattcaaagactccctacccg
gagaagacttggcgggatatgaaagggctcgcgtcggtacgtgaccaatccgggctccaa
gtcgcccgcgaactctggcacgcgcgtgaagagatcagcgagcagcgcgacatcgctccg
gggcggctacttcccaaccgggccttattggctatcgcgctcgccgagccggactctcct
cacggactgactcgtgcgatcgggggtaaaggcatgccctcgcgggacgtgcggcgctgg
ctcggcgtggtcgaacgcgcactttcggcggacccagccacgtggccgcgacgccgagat
ccgcgtgaaaacggcacaccgtcgaaatccggctgggagcgccactaccccgaatcgtgg
cagatgctgcagctgtgccgcgaagacatcgccgccagcgcagaagacttagatattcgt
cccgacattttgctcacgcccgcgattttgcgcgagacggtgtggaacgcgcccgacaag
gcgccggcgtgggatacccaccaggcagcgaccgccctggagaaagcgggcgcgcgaccg
tggcagatccaaatcactgcaccgatcctggccgcagcgcacgcggagatgctcgatttg
gtctag
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