Corynebacterium ihumii: CIHUM_06820
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Entry
CIHUM_06820 CDS
T09115
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cihu
Corynebacterium ihumii
Pathway
cihu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cihu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIHUM_06820 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cihu03019
]
CIHUM_06820 (pnp)
03016 Transfer RNA biogenesis [BR:
cihu03016
]
CIHUM_06820 (pnp)
Enzymes [BR:
cihu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CIHUM_06820 (pnp)
Messenger RNA biogenesis [BR:
cihu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CIHUM_06820 (pnp)
Transfer RNA biogenesis [BR:
cihu03016
]
Prokaryotic type
tRNA degradation factors
CIHUM_06820 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
RNase_PH_C
OB_cyt-4
MnmE_helical
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
WCZ34778
UniProt:
A0ABY7UDM5
LinkDB
All DBs
Position
complement(1383479..1385767)
Genome browser
AA seq
762 aa
AA seq
DB search
MSKFTPKNSYDVHVDEEFGITEAVATLDNGDFGSRTIRFETGQLARQADGSVTTYLDDET
MMLATTTASNQPREGFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTQAILACRLIDRP
LRPTFVKGLRNEVQVVITVMSQHPEEYYDVVAINGASAATQLSGLPVSGPVGGVRMALLA
DDKHPEGQWVAFPNHEQHERCLFEMVVAGRMVERKRGRKTEEDVAIMMVEAGAGVNVVKQ
IEAGYPAPTESTVAEGIEAAKPFVETLCRAQRGLADEMAKETKEFPLFPAYSDKVFNAVE
KKASKKLAKLLTIKGKAERDEATNEYMEDIEDSLLEDFDIDDDDREEYAAASKEIRAAYN
ALMKQIVREKILAEGFRIDGRGVTDIRDLEVEVELIPRAHGSALFERGETQILGVTTLDM
LKMEQHLDSLHPEDSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALLPVIPSR
EDFPYTIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLAAPVAGIAMGLVSGEVNGETE
YVALTDILGAEDAFGDMDFKVAGTREFITALQLDTKLDGIPSKVLADALNQARDARDAIL
DTMAEVIEGPDEMNSLAPKITTVKVPVAKIGEVIGPKGKTINQITEDTGAEISIEDDGTV
FVSAASGEAADAAIEKINAIANPQMPKVGERYLGTVVKTVAFGAFVSIMPGTDGLIHISN
LGGNTRVENVEDVINVGDKVEVEIRDIDNRGKISLVPVEDGE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaattcacgccaaagaactcgtacgacgtccacgtggacgaggagttcggcatc
accgaggcagtagccaccctggacaacggcgacttcggctcgcgcaccattcgttttgaa
acggggcagctggcacgtcaagcggacggctccgtgaccacctacctcgacgacgagacg
atgatgctggccaccaccaccgcatccaaccagccgcgcgagggcttcgacttcttcccg
ctgaccgtggacgtggaagagcgcatgtacgctgcgggcaagatcccgggatccttcttc
cgccgcgagggccgcccctccacgcaggcgatcttggcttgccgtctcattgaccgcccg
ctgcgcccaaccttcgtcaagggtctgcgcaacgaggtgcaggttgtcatcaccgtgatg
tcgcagcacccggaggagtactacgacgttgttgctatcaacggcgcatccgccgcgacc
cagctgtccggcctgccggtttccggcccggtcggcggcgtgcgcatggcgctgctggca
gacgacaagcacccggagggccagtgggtggccttcccgaaccacgagcagcacgagcgc
tgcctgttcgagatggttgtggctggccggatggtcgagcgcaagcgcggccgcaagacc
gaagaagacgtcgccatcatgatggtggaggctggcgccggcgtgaacgtggtcaagcag
atcgaggctggctacccggcaccaaccgagtccaccgtcgccgagggcatcgaggccgcc
aagccgttcgttgagacgctgtgccgcgcccagcgcggcctggccgacgagatggccaag
gagaccaaggagtttccgctcttcccggcgtactccgacaaggtcttcaacgccgtggag
aagaaggcatccaagaagctggccaagctgctgactatcaagggcaaggccgagcgcgac
gaggccaccaacgagtacatggaagacatcgaggacagtctcctcgaggacttcgacatc
gacgatgatgaccgcgaggagtacgcggcggcgtcgaaggaaatccgcgcggcctacaac
gcgttgatgaagcagatcgtgcgcgagaagatcctcgccgagggcttccgcatcgacggc
cgcggcgtgaccgacatccgcgacctcgaggtcgaggtcgagctcatcccgcgcgcccac
ggctccgccctgttcgagcgcggagagacccagatcctgggcgtgaccaccctggacatg
ctgaagatggagcagcacctggattctttgcacccggaggattccaagcgctacatccac
cactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccgaagcgc
cgcgagatcggccacggtgcactcgcggagcgcgcgctgttgccggtgatcccgtcgcgg
gaggacttcccgtacaccatccgccaggtctccgaagcgctgggctccaacggctcgacc
tccatgggctcggtgtgcgcctccacgctgtcgctgtacaacgcgggtgtgccgctggcc
gccccggtggccggcatcgccatgggcctggtctccggcgaggtcaacggtgaaaccgag
tacgtcgcgctgaccgacatcctcggtgcggaggacgcgttcggcgacatggacttcaag
gttgccggcacccgcgagttcatcaccgcgttgcagctggacaccaagctcgacggcatc
ccgtcgaaggtgctggcagacgccctgaaccaggcccgcgacgcgcgcgacgccatcctg
gacaccatggcagaggtcatcgagggcccggacgagatgaactcgctcgctccgaagatc
accaccgtgaaggtccccgtggccaagatcggcgaggtcatcggcccgaagggcaagacc
atcaaccagatcaccgaggacaccggcgccgagatctccatcgaggacgacggcaccgtg
ttcgtctccgccgcatccggcgaggcagcggacgccgcgatcgagaagatcaacgccatt
gccaacccgcagatgccgaaggtgggcgagcgctacctcggcaccgtggtcaagaccgtg
gcgtttggcgcgttcgtgtccatcatgccgggcactgacggcctgatccacatctccaac
ctgggtggcaacacccgcgtggaaaacgtcgaggacgtcatcaacgtcggcgacaaggtc
gaggtggagatccgcgacatcgacaaccgcggcaagatctcgttggttccggtcgaggac
ggcgagtaa
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