Corynebacterium ihumii: CIHUM_08545
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Entry
CIHUM_08545 CDS
T09115
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cihu
Corynebacterium ihumii
Pathway
cihu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cihu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIHUM_08545 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cihu03019
]
CIHUM_08545 (rng)
03009 Ribosome biogenesis [BR:
cihu03009
]
CIHUM_08545 (rng)
Enzymes [BR:
cihu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CIHUM_08545 (rng)
Messenger RNA biogenesis [BR:
cihu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CIHUM_08545 (rng)
Ribosome biogenesis [BR:
cihu03009
]
Prokaryotic type
rRNA processing factors
CIHUM_08545 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
PCB_OB
EFP_N
Motif
Other DBs
NCBI-ProteinID:
WCZ35119
LinkDB
All DBs
Position
complement(1761328..1764048)
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AA seq
906 aa
AA seq
DB search
MAGHKASEENIYAAFDRSQLAEKTRVFTLAKALGVPSKELVVALSELGVVKVAQSTLTRA
ESEQLLDALANTAATTDDEETADDAADEKIRQRVRKDVENEIHQIEDKVEADLREGPLTD
VEPEITPVPEETANRAPVFKAPERKRRRATRAAAPSEEKEPEPIDEVSPEDADKQEPEVI
EEPKAIKGSSRLEAQRRRRTEKREEHRKRSRIVSQAEFLARRESVERHMVVRERDRRDGH
GKITQVGVLEDGLLVEHFVTAESQSSMIGNIYLGRVQNVLSSMEAAFIDIGQGRNGVLYA
SEVDWKAAGLGGRSRRIEQALKSGDQVLVQVTKDPVGHKGARLTTQISLAGRYLVYVPGG
RSAGISRKLPAPERKRLKEILNHVVPGKGGAIIRTAAENVPEEAIAADVNRLHNQWTAIQ
EQAEKEKNSKGAKPVTLYEEPNILVKVVRDLFNEDFTSLIVDGRKPWNTVHAYVQSVAPD
LLDRLEKFDRSSHDGKDAFEVHRIDEQLQKALSRTVWLPSGGTLVIDRTEAMTVIDVNTG
KFTGSGGSLEETVTSNNLEAAEEIVRQVRLRDIGGMIIIDFIDMILPENQDLVLRRLNEA
LGRDRTRHQVSEVTSLGLVQMTRKRLGNGLLETFSTECECCGGRGIIVTDDPVEHDPYSE
RGRDERSKRRSRDGEHRSSRGRNKSADSDAETARRPRRSKRKQLNEDEMDNLLNSIFSDD
SNDGDDRDGSDGSDSDASEGRRRSSRRRGRRGGNRGRGPQTDTQGKQEERPESDKRPESD
KDVPQQSFEEAVEEFDNSPRRKRRTRGNSRSDVRPRRQDYQDTAAETAPDAEKDEPVAKA
KPAAGRRGRRRAVRKSNATANATTNAAAAQRDAGSGEKEKRREAERRREAKASPRRGRRR
ATRRSS
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
ttggctggtcacaaggcatccgaagagaatatttacgccgcgttcgaccgttcccagctg
gcggagaaaacccgcgtgttcacgctggctaaagcgctgggcgtgccgtcgaaggagctc
gtggtcgcgctgtcggagctcggcgtggtcaaagttgcgcagtcgacgctgacgcgcgct
gaaagcgagcagcttctcgacgcactcgcgaacaccgccgccaccaccgacgacgaggag
actgcagacgacgccgcggacgagaagatccgccagcgcgtgcgcaaggacgtggaaaac
gagatccaccaaatcgaggataaggtcgaggcggacctgcgcgagggcccgctcaccgac
gtcgagccggagatcacccccgtgccggaggagaccgccaaccgcgcccccgtcttcaag
gccccggagcgcaagcgccgccgcgccacccgcgccgcggcgccgagcgaggagaaggag
cccgagcctatcgatgaggtttcgccggaggacgcggataagcaagagcccgaagtgatc
gaagagccgaaggcgatcaagggctcatcccgtttggaagcgcagcgtcgccgccgcaca
gaaaagcgcgaagagcatcgcaaacgctcccgcattgtcagccaggccgagtttttggcg
cgccgcgagtccgtcgagcgccacatggtggtgcgcgagcgcgaccgccgcgacggccac
ggcaagatcacccaggtcggcgtgctcgaggacgggctgctggtggagcactttgtcacc
gccgaaagccagtcctccatgatcggcaacatctacctgggacgcgtgcaaaacgtgctg
tccagcatggaagccgcgttcatcgacatcgggcagggccgcaacggcgtgctctacgcc
tccgaggtggactggaaggccgccggtttgggcgggcgctcgcgccgcattgagcaggcc
ctcaaatccggcgaccaggtgctggtgcaggtgactaaggaccccgtcggccacaagggt
gcgcgcctgaccacccagatctcgctggctggacgctacctggtgtatgtgccgggcggc
cgcagcgcgggcatttcccgcaagctgccggcgccggagcgcaagcgcctgaaggaaatc
ctgaaccacgtcgtgcccggcaagggcggggcgatcatccgcaccgccgccgaaaacgtg
ccggaagaagccatcgcggccgacgtgaaccggctgcacaaccagtggaccgcgatccag
gagcaggcggaaaaggagaaaaactccaagggcgcgaaaccggtgaccttgtatgaggag
ccgaacatcctggtcaaggttgtgcgcgacctgttcaacgaggacttcacctcgctcatc
gtggacggccgcaagccgtggaacaccgtccacgcctacgtgcagtccgtcgccccggac
cttctggatcgcctggagaagtttgaccgctccagccacgacggcaaggacgccttcgag
gtccaccgcatcgacgagcagctgcaaaaggcgctgtcgcgcactgtgtggctgccgtcg
ggtggcaccctggtcatcgaccgcaccgaggccatgaccgtcatcgacgtcaacaccggc
aagttcaccggctccggcggctcgctggaagagacggtcacctccaacaacctggaggcc
gccgaggagatcgtgcgccaggtccgcctgcgcgacatcggcggcatgatcatcatcgac
ttcatcgacatgatcctccccgaaaaccaggatctcgtgctgcgccgcctcaacgaggca
ctcggccgcgaccgcacccgccaccaggtctccgaggtcacctccctgggcctggtgcag
atgacccgcaagcgcctgggcaacggcctgctggagacgttttccaccgagtgcgagtgc
tgcggcggccgcggcatcatcgtcaccgacgaccccgtcgagcacgacccgtactccgag
cgtggccgcgacgagcgctccaagcgccgttcgcgtgacggcgagcaccgctcctcccgc
ggccggaacaagtccgccgactcagacgccgagaccgcgcgccggccacgccgctccaag
cgcaagcagctcaacgaagacgagatggacaacttgctcaactcgatcttcagcgatgac
agcaacgacggcgacgacagggatggcagcgacggcagcgacagcgacgcttccgagggg
cgccgccgttcctcgcgccgccggggccgccgcgggggcaaccgcggccgcgggccccag
acagacacccagggcaagcaggaagaacgcccggaaagcgacaagcgcccggaaagcgac
aaggacgtcccgcagcagagcttcgaggaagcggtggaggagttcgacaactcgccgcgc
cgcaagcgccgcacccgcggcaattcccgctccgacgtccgcccacgccgccaggactac
caggacaccgccgccgagactgccccggacgccgagaaggatgaaccggtagcgaaggcg
aagccggcggcgggccgcaggggccgccgtcgcgccgtgcgcaagtccaacgccacagcc
aacgccacaacaaacgcagcagccgcgcagcgcgacgctggatctggggagaaggagaag
cgtcgggaggcggagcgtcgtcgagaagcaaaggcttccccgcggcgcggacgcaggcgc
gccacccgccgcagcagctaa
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