Corynebacterium imitans: CIMIT_01715
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Entry
CIMIT_01715 CDS
T03237
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cii
Corynebacterium imitans
Pathway
cii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIMIT_01715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cii03021
]
CIMIT_01715
03400 DNA repair and recombination proteins [BR:
cii03400
]
CIMIT_01715
Enzymes [BR:
cii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIMIT_01715
Transcription machinery [BR:
cii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CIMIT_01715
DNA repair and recombination proteins [BR:
cii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CIMIT_01715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AIJ32794
UniProt:
A0A076NE97
LinkDB
All DBs
Position
373215..377222
Genome browser
AA seq
1335 aa
AA seq
DB search
MFDVNLFNELRIGLATAEDIRKWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDMSTLEAEMLLEKKEVEEDANSEIAERAHKLEED
LAELEASGATAAARKKVQQAADKEMTHIREAGEREVERLEEIWQTFQKLAPKQMIIDEVL
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLEAEAEELRTIIAEGKGQKKVRALKRLKVVA
AFQRSGNDPAGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGSRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVDNDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAIPRLDMVTGLYFLTMEKSTSEVGGE
GAYAPADENGPARGVYSSYREAIMAYDRGVLGLQAPIKVRIDHLRPTVEVEKEQFPDGWT
KGQPWMMDTTLGRIMFNELLPYNFPYQEGAMVRKGGGSGKVLLGDIIQGMVEKYPMITVA
QTLDKLKDAGFYWSTRSGVTITMSDVLVLPNKTEVLERYEKEAEEIERKYWEKGALTEEN
RYDRLVELWQDATNKVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLSVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREL
DCGTHQGVKVPVAVPLTGSEDKFARHELVETSVSGRVLASDVKDAEGNVLFEAGTELSEE
RIDTLVEKGVTELKVRSVLTCQTPTGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPG
TQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVAGTISLEDEGNFWTLTIH
PDDGSDDVVYEKLSKRQGLAQVRRPMESNPDAMIERSLREGDHVEVGDRLLRGAADPHDV
LEVLGRRGVEKHLIDEVQAVYRTQGVSIHDKHIEIIIRQMLRRGTVIDSGSTEFLPGTLI
DLAEARQVNAATVADEGQPAEMRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKR
SDQLIGLKENVIIGKLIPAGTGISRYRNIQVKPTEAARSAAYSIPSFGEGIYGDEGFGEY
TGASVPLDEYGLDQI
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaacctcttcaacgagcttcgcatcggcctggccactgccgaagacatc
cgtaagtggtcccacggtgaagtaaagaagccggagactattaactaccgcaccctcaag
cccgagaaggacggcctgttctgcgagcgcattttcggccccacccgcgactgggagtgc
gcctgcggtaagtacaagcgcgtccgttacaaaggcatcatctgtgagcgctgcggcgtc
gaggtgaccaagtccaaggtgcgccgcgagcgcatgggccacatcgagctcgccgctccc
gtgacccacatctggtacttcaagggcgtgccctctcgcctgggctacctgcttgacctt
gcgccgaaggacctcgagcgcatcatttacttcgctgccaacatcatcaccagcgtcgac
gaggaggcacgtcacaacgacatgtccaccctcgaggcggagatgctgctggagaagaaa
gaagtcgaggaggacgctaactccgagatcgccgagcgcgcccacaagctggaggaagac
ctcgccgagctcgaggcttccggggcgaccgccgctgcccgtaagaaggtgcagcaggcc
gcggataaggagatgacccacatccgcgaggcaggcgagcgcgaggttgagcgcctcgag
gagatctggcagaccttccagaagctggctccgaagcagatgattatcgacgaggtgctc
tacgaggagctcgtcgaccgctacgaggactacttcaccggcggcatgggcgccgaggcg
atccagaccctgatccgcaacttcgacctcgaggccgaggccgaggagctgcgcaccatc
atcgccgagggcaagggccagaagaaggtccgcgcgctcaagcgtctcaaggttgtcgct
gcgttccagcgctctggtaatgatccggccggcatgatcctggacgcgatcccggtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgccacctccgacctg
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgatctg
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgttgacgcg
ctgttcgacaacggccgccgcggccgtccggtcaccggtccgggctcccgcccgctgaag
tccctgtctgacctgctcaagggcaagcagggccgcttccgtcagaacctgctgggcaag
cgtgtcgactactccggtcgttccgtgattattgtcggcccgcagctcaagctgcacgag
tgcggtctgccgaagctgatggcactcgagctgttcaagcccttcgtgatgaagcgccta
gtggacaacgactacgcgcagaacatcaagagcgcgaagcgcatggtcgagcgccagcgc
cctgaggtgtgggacgtcctcgaagaggcgatttccgagcacccggtgttgctcaaccgc
gcaccgaccctgcaccgcctgggcatccaggccttcgagccgaagctggtcgagggtaag
gccatccagctgcacccgctggcctgtgaggccttcaacgccgacttcgacggtgaccag
atggcagtccacctgccgctgtccgcagaggcgcaggccgaggcccgcgtgctcatgctg
tcgtccaacaacatcctgtccccggcatccggtaagccgctggcgatcccgcgactggat
atggtgaccggcctgtacttcctcaccatggagaagtccacctccgaggtcggcggcgag
ggtgcatacgcgcctgccgacgagaacggcccggcacgcggcgtgtactcctcctaccgc
gaggccatcatggcctacgaccgcggcgtgctcggtctgcaggctccgatcaaggtccgc
atcgaccacctccgcccgacggttgaggtggaaaaggagcagttcccggacggctggacc
aagggtcagccgtggatgatggacaccacgctcggccgcatcatgttcaacgagctgctg
ccgtacaacttcccgtaccaggaaggcgcgatggtgcgtaagggcggcggctccggcaag
gtgctgctcggcgacattatccagggcatggtggagaagtaccccatgatcactgttgcg
cagaccctggacaagctgaaggacgccggcttctactggtccacccgctcgggcgtgacc
attacgatgtccgacgtgctcgtgctgccgaacaagaccgaggtcttggagcgctacgag
aaggaagccgaagagatcgagcgcaagtactgggagaagggtgcgctgaccgaggagaac
cgctacgaccgtctggtcgagctgtggcaggacgccaccaacaaggtcggccaggccgtc
gaggacctgtacccggacgacaacccgattccgatgatcgtgaagtccggtgctgccggt
aacatgcgccagatctggactctggccggcatgaagggcatggttgtgaactcgcgcggt
gagtacatcacccgcccgatcaagacctccttccgcgaaggcctgtccgtgatggagtac
ttcaacaactcccacggttcccgtaagggcctggccgataccgcgctgcgtaccgctgac
tccggctacctcacccgtcgtctggtggacgtggcccaggacgtcatcgtccgcgaactg
gactgcggcacccaccagggcgtcaaggttccggttgcggtgccgctcacaggctccgag
gacaagttcgcccgccacgagctggtcgagacctccgtctccggccgcgtactggcttcc
gacgtcaaggacgccgagggcaacgtgctctttgaggccggcaccgagctgtccgaggaa
cgcatcgacacgctcgtagagaagggcgtcaccgagctcaaggtccgctccgtgctgacc
tgccagaccccgaccggtgtctgcgctaagtgctacggcaagtccatggcctctggccaa
ctggtggatatcggcgaggccgtcggcatcgtcgctgcacagtccattggtgagccgggt
acccagctgactatgcgtaccttccaccagggtggtgtcggcggcgacattaccggtggt
ctgccgcgtgtgcaggagctgttcgaggcccgcgtgccgaagaactgcgccccgatcgcg
tcggtggccggtacgatctcgctggaggacgagggcaacttctggacgctgaccatccac
ccggacgacggctccgacgacgtggtctacgagaagctgtccaagcgccagggcctggcc
caggtacgccgcccgatggagtccaacccggacgccatgatcgagcgttccctgcgcgag
ggcgaccacgtggaggtcggcgatcgcctgctccgcggtgcagcggatccgcacgacgtg
ctcgaggtcctcggccgccgcggtgtggagaagcacctcatcgacgaggtccaggctgtc
taccgcacccagggtgtgtcgattcacgacaagcacatcgagatcatcatccgccagatg
ctgcgccgcggcacggtcatcgactccggctcgaccgagttcctgccgggcacgctgatc
gacctcgccgaggcacgccaggtcaacgccgccaccgtcgcggacgaaggccagccggca
gagatgcgctccgagatcatgggtatcaccaaggcctccttggctaccgagtcctggctg
tcggccgcctccttccaggagacgacccgcgtgctcacggacgccgcgatcaacaagcgc
tccgaccagctcatcggcctgaaggagaacgtgatcatcggtaagctgatcccggccggt
acgggcatctcccgctaccgcaacatccaggtcaagccgaccgaggctgcgcgctccgcc
gcgtactccatcccgagctttggcgagggcatctacggcgacgaaggcttcggcgagtac
accggcgcctccgtcccgctcgacgagtacgggctcgaccagatctag
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