Corynebacterium imitans: CIMIT_04985
Help
Entry
CIMIT_04985 CDS
T03237
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cii
Corynebacterium imitans
Pathway
cii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIMIT_04985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cii03021
]
CIMIT_04985
03019 Messenger RNA biogenesis [BR:
cii03019
]
CIMIT_04985
Transcription machinery [BR:
cii03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CIMIT_04985
Messenger RNA biogenesis [BR:
cii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CIMIT_04985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
S1CSD-TOTE-2
HeH
Motif
Other DBs
NCBI-ProteinID:
AIJ33335
UniProt:
A0A076NNF4
LinkDB
All DBs
Position
1051322..1053304
Genome browser
AA seq
660 aa
AA seq
DB search
MTDTSNAAATGNTAELSALKIPELRKIAAEKGLKGVSALRKGDLIQAIVTGEVPRKARAA
AAEAAGDAGGAATAEQNNDAPAASQRRRASRRAAGPADGDAGDNANDAAPHAEDKKSDKP
AKGDKPKKQDREQDSDHDGQNEKSEQGGQKYESRSAARRARRNRARHDNDQHGDNQHSND
QHGNDQHGDNEQDHGGDGKQRDRDNRDNNGGRNNKQNNRGGRNNNRDNNRDNNDDGNQGG
RRGRRNRRNRNRNRDNQHNQQDNNQQLDPEELQEVAGIVDIVDNNAAFIRTTGYRKNNAD
VYVNQKLVRQNGLRAGDAVIGQVRQNGQGHSHGSGRNRQRYNQLVRVDSVNGMNPEEAKQ
RAEFHKLTPLYPNKRLRLETEPKILTTRVIDLVMPIGKGQRALIVSPPKAGKTTILQNIA
NAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTAVAELAIERAKR
LVEMGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIEEGGS
LTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLM
SPEEARVMHKLRRILSALDPQQSIDMLIKQLKKTKSNGEFLMGVANSAPMVADQDSEEYK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacacgagtaacgcggcagctaccggcaacactgccgaactttccgcactgaaa
atccccgagctgcgcaagatcgccgcagaaaaggggctcaagggcgtctccgcgctgcgc
aagggggacctcatccaggccatcgtgaccggcgaggtgccgcgcaaggcacgcgccgca
gccgctgaggccgcgggggacgcagggggcgcagccaccgctgagcagaacaacgacgcg
cccgctgccagccagcgccgccgcgcgtcgcgtcgcgccgcagggcccgccgacggggac
gctggggacaacgccaacgatgccgcgccgcacgctgaggacaagaagtccgacaagcct
gcgaagggcgacaagccaaagaagcaggaccgcgagcaggacagcgatcacgacggccag
aacgagaagtctgagcagggcggccaaaagtacgagtcccgctccgccgcgcgccgcgca
cgccgcaaccgggcccgccacgacaacgatcagcacggcgacaaccagcacagcaacgat
cagcacggcaacgatcagcacggcgacaacgagcaggaccacgggggcgacgggaagcag
cgcgaccgggacaaccgtgacaacaacggcggccgcaacaacaagcagaacaaccgcggc
gggcgcaacaacaaccgggacaacaaccgggacaacaatgatgacggcaaccagggcggc
cgccgcgggcgccgcaaccgtcggaaccggaaccgcaaccgcgataaccagcacaaccag
caggacaacaaccagcagctggacccggaggagctgcaggaagtcgccggcatcgtggat
atcgtggataacaatgccgcgttcatccgcacgaccggctaccgcaagaacaacgctgac
gtctacgtcaaccagaagcttgtgcggcagaacgggctgcgcgcaggcgacgcggtcatc
ggtcaggtccgccagaacgggcagggccactcgcacggctcgggccgcaaccgccagcgc
tacaaccagctcgtccgcgtcgacagcgtcaacgggatgaacccggaggaagcgaagcag
cgcgccgagttccacaagctcaccccgctgtacccgaacaagcgcctgcgcctggaaacc
gagccgaagatcctcaccacacgcgtgatcgacctggtcatgccgattggtaagggccag
cgcgcgctgatcgtctccccgccgaaggccggtaagacgacgatcctgcaaaacattgcc
aacgcgatcgcgacgaacaacccggagtgctacctcatggtcgtgctggtggacgagcgc
cccgaggaagtcaccgacatgcagcgcagtgtgaagggcgaggttattgcctcgaccttc
gaccgcccgccgtcagagcacaccgcggttgcggagctggcgatcgagcgcgcgaagcgc
ctggtggagatgggccaggacgtcgtcgtcctgctcgactcgatcactcgcctgggccgt
gcgtacaacaactcctcgccggcgtccggccgcatcctctccggcggtgtggactcgaac
gccctgtacccgccgaagcgcttcctgggcgctgcccgcaacattgaagagggcggctcg
ctgacgattatcgccaccgcgatggtggagaccggctcggccggcgacaccgtgatcttc
gaggaattcaagggcaccggcaacgcggagctgaagctggaccgcaagatcgcggagcgc
cgcgtcttcccggcagtggacgtcaacccctccggtacccgcaaggacgagctgttgatg
agcccggaggaggcgcgcgtgatgcacaaactgcgccgtatcctgtcggcgctggatccg
cagcagtcgatcgatatgctgattaagcagctgaagaagacgaaatccaacggtgagttc
ctcatgggcgtggctaactccgcgccgatggtcgctgaccaggactcggaggagtacaag
taa
DBGET
integrated database retrieval system
