Citromicrobium sp. JL477: WG74_02690
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Entry
WG74_02690 CDS
T04089
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cij
Citromicrobium sp. JL477
Pathway
cij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WG74_02690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cij03021
]
WG74_02690
03019 Messenger RNA biogenesis [BR:
cij03019
]
WG74_02690
Transcription machinery [BR:
cij03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
WG74_02690
Messenger RNA biogenesis [BR:
cij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WG74_02690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
Spore_III_AA
ATPase_2
AAA_22
S1CSD-TOTE-2
AAA_25
AAA
GpA_ATPase
AAA_14
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ALG59885
LinkDB
All DBs
Position
543547..544812
Genome browser
AA seq
421 aa
AA seq
DB search
MHLKDLKKKAPADLVSMAEELGVEAAGTMRRQDLMFCILRELAEDEDYDEQIMGIGTIEV
MQDGFGFLRSPEANYLAGPDDIYVSPNQIRKWGLRTGDTVEGEIRAPREGERYFALTKLT
SVNYDDPEAVRMRTNFDNLTPLYPEQKLNLDTLDPTVKDKSARVIDIISPQGKGQRALIV
APPRTGKTVLLQNIAKAITDNHPEVFLLVLLVDERPEEVTDMQRSVNGEVISSTFDEPAQ
RHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
LDVGKSGTRKEELLVEKDKLSKMWVLRRILMQMGTIDSMEFLLDKMKDSKTNEDFFDTMN
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaaagacttaaagaagaaggctccggccgatctcgtcagcatggcggaggaa
ctgggcgtcgaggcggcgggcacgatgcgccgccaggacctgatgttctgcatcctgcgc
gaactcgcggaggacgaggattacgacgagcagatcatgggcatcggcacgatcgaggtg
atgcaggacggcttcggcttcctccggtcgcccgaggcgaactatctcgccgggccggac
gacatctacgtgtcgcccaaccagatccgcaaatggggcctgcgcaccggcgatacggtg
gagggcgagattcgcgcaccgcgcgagggggagcgctatttcgcgctgaccaagctgacc
agcgtcaactacgacgatcccgaagcggtgcggatgcgcaccaatttcgacaacctgacg
ccgctctatcccgaacagaagctcaacctcgacacgctcgatcctacggtcaaggacaag
agcgcgcgggtgatcgacatcatcagtccgcagggcaagggccagcgcgcgctgatcgtc
gcgccgccgcgcacgggtaagacggtgctgctgcagaacatcgccaaggcgatcaccgac
aatcaccccgaggtgttcctgctggtcctgctggtcgacgagcggcccgaagaagtaacc
gacatgcagcgttcggtgaacggcgaggtgatctcctcgaccttcgacgaacccgcgcag
cgccacgtccaggtcgccgaaatggtgatcgaaaaggccaagcggctggtcgagcacaag
aaggacgtcgtgatcctgctcgattcgatcacgcgcctcggccgggcctacaacaccgtc
gttcccagctcgggcaaggtgctgaccggcggtgtcgacgcaaacgcgctgcagcgcccc
aagcgcttcttcggtgcggcgcgtaacatcgaggaaggcggttcgctttcgatcatcgcc
accgcgctgatcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggcaactcggaaatcgtcctcgaccgcaaggttgcggacaagcgcatcttccccgcg
ctcgacgtcggcaagtccggcacgcgcaaggaagaactgctggtcgagaaggacaagctc
tccaagatgtgggtgctgcgccgcatccttatgcagatgggcaccatcgattcgatggaa
ttcctgctcgacaagatgaaggattcgaagaccaacgaagacttcttcgacaccatgaat
cagtag
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