Citromicrobium sp. JL477: WG74_10470
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Entry
WG74_10470 CDS
T04089
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cij
Citromicrobium sp. JL477
Pathway
cij03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WG74_10470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cij03400
]
WG74_10470
Enzymes [BR:
cij01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WG74_10470
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WG74_10470
DNA repair and recombination proteins [BR:
cij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WG74_10470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
DUF5817
DUF7575
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ALG61210
LinkDB
All DBs
Position
2144578..2145360
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AA seq
260 aa
AA seq
DB search
MPELPEAEANRLRVERDCLHRTIEAAEPGDDTSYIELPGDNERGRLVGHQFTRTHRHGKL
IFAGSESGPWICVHLGMSGSLRPFDEADGPPDYAKFLIRFEGERRLAFRCPRKLGWVRVV
DSPEAEIERIGFGPDALEIGRDAFAEVIGDSRGAIKSALIEQKKLAGVGNLWSDEILYRT
AIDPQRKGTDLSDSQLGDIYDAMRDILHAVVDTEADYSKLPDDWLIHTRDEGAECPRCGG
EIVRTKVGGRSAFHCTRHQE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagccgaagccaatcgtctgcgtgtggagcgcgactgcctccat
cgcacgatcgaggcggcggagccgggcgatgacaccagctatatcgaactgcccggcgat
aacgagcgcggtcggctggtcggccaccagttcacccgcacccaccgccacggcaagctg
atcttcgctggcagcgaaagcggcccgtggatctgcgtccacctcggcatgagcggatcg
ctgcgcccgttcgacgaggcggatggcccgcccgattatgcgaaattcctgatccgcttc
gaaggcgagcgccgcctcgccttccgctgcccgcgcaagctcggctgggtgcgcgtggtc
gacagccccgaggcggagatcgagcggatcggcttcggcccggatgcgctggagatcggg
agggacgccttcgccgaggtgatcggcgattcgcgcggcgcgatcaaatccgcgctgatc
gagcagaagaagctcgccggggtcggcaacctgtggtcggacgagatcctgtaccgcacc
gctatcgatccgcagcgcaagggcaccgatctctccgacagccagctaggcgacatctac
gatgcgatgcgcgacatcctgcacgcggtagtcgatacggaagcggactacagcaagctg
cccgacgactggctgatccatacccgcgacgaaggtgccgaatgcccgcgatgcggtggc
gagatcgtcaggaccaaggtgggcgggcgcagcgcttttcactgcacccgccaccaggaa
tag
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integrated database retrieval system
