Citromicrobium sp. JL477: WG74_10615
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Entry
WG74_10615 CDS
T04089
Name
(GenBank) ATP-dependent exonuclease
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cij
Citromicrobium sp. JL477
Brite
KEGG Orthology (KO) [BR:
cij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cij03400
]
WG74_10615
Enzymes [BR:
cij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WG74_10615
DNA repair and recombination proteins [BR:
cij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
WG74_10615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALG61233
LinkDB
All DBs
Position
complement(2175017..2178553)
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AA seq
1178 aa
AA seq
DB search
MAGPRERAGGHAMSDTIHTLLPEQGHAADPGHSVWLSASAGTGKTQVLSARVLRLLLQPG
VEPGSILCLTFTKAGAAEMATRVNETLARWVRMEETLLAQHLRAIGAKVDPTTLAHARTL
FTRVLDCPGGGLRIDTIHAFAQYLLAAFPEEAGLEPGTVAMDDRTRGLLAREVLTELVAN
ADEADNSALAMLSLRLGPDGVKQWLMACAKARELWEGPQGWQSPMRRQVLAMLGLPSDFS
EADLVRECADDRFDCGSLRACLATLQDWNTKSGRDAAEPISAWLAADPDQRLATLACFNG
SLLVADGSKPKNLTNLVKRDPTYEGNVAAVQASLDAIRDKFALLALAEYLTPALELGRRF
ALRWDEAKRVHGLVDFDDQIARAATLLGNSEMAQWIGYKLDRSFDHILVDEAQDTNDSQW
AIIDALTQDFFDGLGAAGARLRTIFVVGDYKQAIFGFQGTEPRLFVDKREQYDARINSAI
ANAEALAHETREAPLVPLAPLARLGLERNFRSSQVILDFVDRAVAHVGTQAMGMPGEEVQ
HTGEDRPGRVTLWAPIRAEESDDPEAVEEDGAETWLPAPERRMADRIAAQVKQWLEDGHP
LTKGGTRRAGPGDIMILVRKRRALAGLIVARLHAAGVPVAGVDRLRLGAPLAVKDLLAAL
RFAAQPRDDLMLANLLVSPLGGWSQDDLLEHGLRDKSVGLWDHIRRSDAPLCMATADRLR
ALLARVDYEHPQALLHWLLTGPWDGRRKLVARLGREANDPIDELVGAAFAYCAEHTPSLQ
GFLNWFDASDEELKREAAGSGDAVRVLTAHGSKGLQAPIVILADATGNPDRGPARAGELA
TDDGRTVPLPSLPKEAKAGPVVAAEEAKKAREREEHWRLMYVAMTRAEEALYIGGALLPS
DKDVPEASWYAQAAALFDSEGGGEGEGVSDPIWGERHDLGTLADIAPPAPDAASRAQRPA
LPEWATRAPAAEPSPPRPLAPSAAGDDLAPNPPGLATGAEAAQRGTLIHRLLERMPDIAP
EDREARGSAWLAAQAGDLSEGARAAMLEQALGVLDHPDFAALFAPGALAEVSLAATVEGQ
VVTGKLDRLCVAEEEVLVVDYKTTRRAPTSLEQVPTATLRQMSAYAHALAAIYPGRRICA
ALLYTQTPQLIVLPHAVLAAHKPGLGDKQLSLPGSAFA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggctgggccgagagagcgagccgggggccacgcgatgagcgacacaatccacacgctt
ttgccggaacagggccacgcggcggacccgggccattccgtgtggctttccgccagcgcg
ggcaccggcaagacgcaggtgctctcggcgcgcgtgctgcgcctcctgttgcagcccggc
gtggagcccggatcgatcctgtgcctcaccttcaccaaggcgggcgcggcggagatggcg
acccgcgtgaacgagacgctggcccgctgggtgcggatggaggaaaccctgctggcccag
cacctgcgcgccatcggggcgaaggtcgatccgacaacgctggcccatgcccgcacgctg
ttcacccgggtgctcgattgccccggcggcgggctgcgcatcgatacgatccacgctttt
gcgcaatacctgctcgccgcctttcccgaggaagcggggctggagccgggcacggtcgcg
atggacgatcgcacgcgcggcctgctcgcgcgcgaggtgctgaccgaactggtcgccaac
gcggacgaggcggataacagcgcgctggcgatgctctcgctcaggctcgggcccgacggg
gtcaagcaatggctgatggcctgcgccaaggcacgcgagctgtgggaagggccgcagggc
tggcagagcccgatgcgccggcaggtgctcgcgatgctaggcctgccgagcgatttttcc
gaggccgacctggtgcgcgaatgcgccgacgacaggttcgactgcggctctctgcgcgca
tgccttgcgaccttgcaggactggaacacaaagagcgggcgcgacgcggcggagccgatc
tccgcatggctcgctgccgatcccgatcagcgcctcgccacgcttgcctgtttcaacggc
agcctgctggtcgcagacggctcaaagcccaagaacctgaccaatctggtcaagcgcgac
ccgacctacgagggcaatgtcgcggcggttcaggccagcctcgatgcgatccgggataaa
ttcgcgctgctcgcactcgcggaatatctcacccccgcgctcgaactggggcggcgcttt
gccttgcggtgggacgaggcgaagcgggtgcatggcctcgtcgatttcgacgaccagatc
gcacgcgcggccacgctgctcggcaattcggagatggcgcagtggatcggctacaagctc
gaccgcagtttcgaccacatcctggtcgacgaggcgcaggataccaatgacagccagtgg
gcgatcatcgacgcgctgacgcaggatttcttcgatgggctgggtgcggcgggggcgcgg
ctgcgcacgatcttcgtggtcggcgattacaagcaggcgatcttcggctttcagggcacc
gaaccgcgcctgttcgtggacaagcgcgagcaatatgacgcgcggatcaacagcgcgatc
gccaatgccgaggcgctcgcgcatgaaacccgcgaggccccgctggtcccgctcgcgccg
ctcgcccgcctggggctggagcgcaatttccgatcatcgcaggtgatcctcgatttcgtc
gaccgcgcggtggcgcatgtcggcacgcaggcgatggggatgccgggcgaagaggtgcag
cataccggcgaagatcgtcccgggcgggtgacgctgtgggcaccgatcagggccgaggaa
agcgacgatcccgaagcggtcgaggaagacggtgcggaaacctggctgcccgcgccagag
cgccgcatggcggaccggattgccgcgcaggtgaagcagtggctcgaagacggccacccg
ctgaccaagggcggcacgcgccgggccgggccgggcgatatcatgatcctcgtgcgcaag
cgccgcgcgctcgccgggctgatcgtcgcgcggctccatgcggcgggcgtgccggtggcg
ggcgtcgatcggctgcggctgggcgctccgctggcggtgaaggatctgctcgccgcgctg
cgcttcgccgcgcagccgagggacgacctgatgctcgccaacctgctggtctctccgctg
ggcggctggtcgcaggacgacctgctcgagcatggcctgcgcgacaagagcgtcggcctg
tgggaccatatccgtcgcagcgacgcgccgctgtgcatggcgacggccgaccggctgcgc
gcgctgctggcgcgggtcgattacgagcatccgcaggcgttgctccactggctgctgacc
ggtccgtgggacgggcggcgcaagctggtcgcgcggctggggcgcgaggcgaacgatccg
atcgacgaactggtcggcgcggcgttcgcctactgcgccgaacacacgcccagccttcag
ggcttcctcaactggttcgatgcttcggacgaggaactgaagcgcgaagcggcgggcagc
ggtgatgccgtgcgcgtgctgacagcgcatggctcgaaggggttgcaggcaccgatcgtg
atcctcgccgatgcgaccggcaatcccgatcgcggccctgcgcgcgcgggcgagctggcg
accgatgacgggcgcaccgtcccgcttccctcgctgcccaaggaggcgaaggcggggccg
gtggtcgcggccgaggaagcgaagaaggcgcgcgagcgcgaggagcactggcggctgatg
tacgtcgcgatgacccgcgccgaggaagcgctctatatcggcggcgcattgctgccgagc
gacaaggacgtgcccgaggcgagctggtatgcgcaggccgctgcgctgttcgacagcgaa
ggcgggggcgagggggagggcgtctccgacccgatctggggcgagcggcacgatctgggc
acgctggccgatatcgcgccgcccgctcccgatgcagcgagccgagcacagcgccccgcg
ctgcctgaatgggccacccgcgctcccgccgccgagccgagcccgccgcgaccgctcgcg
ccgtctgccgccggggacgacctcgcgccgaacccaccggggctggcgaccggggccgag
gcggcgcagcgcggtacgctgatccaccgcctgctcgaacgcatgcccgatatcgcgccc
gaggaccgcgaggcgcggggctcggcatggctcgccgcgcaggccggcgatctgtcggag
ggggcgcgcgcggcgatgctggagcaggcgcttggcgtgctcgaccatcccgatttcgcc
gcgctgttcgcgcccggtgcgctggccgaggtctcgctcgccgcgacggttgaggggcag
gtggtcaccggcaagctcgaccggctgtgtgtggccgaggaagaggtgctggtggtcgat
tacaagaccactcgccgcgcgcccacatcgctcgaacaggtgcccaccgcgacgctgcgg
cagatgtccgcctatgcccacgcgctcgccgcgatctatcccgggcggcggatttgcgcg
gcgctgctctatacccagaccccgcagctgatcgtgcttccgcacgcggttctggccgct
cacaagcccggcttgggggacaagcagctaagtttgcccggctccgcctttgcgtaa
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