Citromicrobium sp. JL477: WG74_12435
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Entry
WG74_12435 CDS
T04089
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cij
Citromicrobium sp. JL477
Brite
KEGG Orthology (KO) [BR:
cij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cij03016
]
WG74_12435
Enzymes [BR:
cij01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
WG74_12435
Transfer RNA biogenesis [BR:
cij03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WG74_12435
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALG61548
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All DBs
Position
2568397..2569572
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AA seq
391 aa
AA seq
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MKIHDLITTTDALADLCDRLGKGDFVCVDTEFMRENTYWPELCLVQIGDEHEAAAIDPLA
DGIDLKPLLDLLTENEDVLKIFHAGSQDVEIFYNLTGKTPHPIFDTQIAMMAISQSEQIG
YANLVEHWLDKTIDKGARFTDWSRRPLTDRQLEYAIGDVTYLAKIFPRILKKLMKTDRGM
WLNAEMEKLADPENYAIEPDKAWKRIRAQGRNAQVLGRLKAVAAWREGEAQHKNIPRGRI
MRDETLADIASHPPKKQADLAKVRGLSNAWKDNEIGNRLMDVLENAEPLPDSEMPARNSR
GAPLGKEGALVADLLKLLLKIRAREIDVAPRLLTRSGELEQLAAGVRDLPILEGWRREVF
GRDALDLVEGKLAFAVEKSKLKMTHIDDVED
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccacgacctgatcacgaccaccgatgcactggccgacctgtgcgatcggctc
ggcaaaggcgacttcgtctgcgtcgataccgagttcatgcgggaaaacacctattggccc
gagctgtgcctggtccagatcggcgacgagcacgaggctgcggcgatcgacccgctggcc
gacgggatcgacctcaaacccctgctcgacctgctgaccgagaatgaggatgtgctgaag
atcttccacgcaggcagccaggatgtggagattttctacaacctcaccggcaagaccccg
cacccgatcttcgacacacagatcgcgatgatggcgatcagccagtccgaacagatcggc
tatgccaatctggtcgaacactggctcgacaagacgatcgacaagggcgcgcgctttacc
gactggagccggcgcccgctgaccgaccgccagctggaatacgcgatcggcgacgtgacc
tacctcgccaagatctttccccgcatcctcaagaagctgatgaagaccgatcgcggcatg
tggctcaacgccgagatggaaaagctcgccgatccggagaattacgccatcgagcccgac
aaggcgtggaagcgcatccgcgcgcagggccgcaacgcacaggtgctcggacgcctgaag
gccgttgccgcatggcgcgagggagaggcgcagcacaagaatatcccgcgcggacggatc
atgcgcgacgaaacgctggccgacattgcttcccatccgcccaagaagcaggccgacctt
gccaaggtgcgcggcctctccaacgcgtggaaggacaacgagatcggcaaccgcctgatg
gacgtgctggagaacgccgagccgctgcccgacagcgagatgcccgcgcgcaatagtcgc
ggcgccccgctgggcaaggaaggcgcgctggtcgccgacctgctcaaactgctgctgaag
atccgcgcacgcgaaatcgacgtcgctccgcgcctgctgacccgctcgggcgaactggag
cagctggccgcaggcgtgcgcgatctgccgattcttgaaggctggcggcgcgaggtgttc
ggccgcgatgcgctcgacctggtcgaaggcaagctcgccttcgcggtcgagaagagcaag
ctgaagatgacccatatcgacgatgtcgaggactag
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