Citromicrobium sp. JL477: WG74_14470
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Entry
WG74_14470 CDS
T04089
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cij
Citromicrobium sp. JL477
Pathway
cij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WG74_14470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cij03019
]
WG74_14470
03400 DNA repair and recombination proteins [BR:
cij03400
]
WG74_14470
Enzymes [BR:
cij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WG74_14470
Messenger RNA biogenesis [BR:
cij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WG74_14470
DNA repair and recombination proteins [BR:
cij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WG74_14470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
AAA_30
HHH
Motif
Other DBs
NCBI-ProteinID:
ALG62416
LinkDB
All DBs
Position
complement(2995161..2996930)
Genome browser
AA seq
589 aa
AA seq
DB search
MLDKLHEVFGFRSFRGVQQQVVDRVMAGQSTLAVMPTGAGKSLTYQLPATMLEGTCVVIS
PLIALMHDQLRSASANGIRAATLTSADENRAETVQRLRAGELDLLYVAPERASQGHFRDL
LSQCRISLFAIDEAHCVSEWGHDFRPDYRLLRPLMDQFADVPRLALTATADAHTRSDILT
QLGIAPDGLIVAGFDRPNIRYTIRPRDSLTQQLRRLLAENPGPGIVYAQTRAATERLAES
LSDGKREVRCYHAGLPAEVRAANQAAFVASENMVICATVAFGMGIDKPDVRFVAHAGLPK
SIESYYQETGRAGRDGDPASAELFWGADDFAKARMRIGEVGEARQQGERTRLAALGALVE
TAGCRRAILLRHFGENPPETCGNCDNCLNPPKAIDATVVAQKYLSAVARTRQMYGAGYVE
SILTGQSSERSRSQGHDKLSVFGIVEGEEAALLKPVHRALLVRGALLPTEHGGMMLGPEA
RGFLKGEQPLDLVIPPKRAGGKRGSRAGSGQALNPVDDPLFDALRALRRDIAKENQIPPY
VIFHDSVLRDMAGLRPQTRALLGELPGIGAKKLEAYGDAFLEVIRQHER
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
ttgctggacaagctgcacgaagttttcggattccggtcgttccggggtgtccagcagcag
gtcgtggaccgcgtcatggcgggccagtcgacgctcgcggtgatgcccacaggcgcgggc
aaatcgctgacctaccagctgcccgcgaccatgctggaggggacctgcgtggtcatcagc
ccgctgatcgcgcttatgcacgaccagttgcgcagcgccagcgccaacgggattcgcgcg
gccacgctgaccagcgctgacgaaaaccgcgcagaaacggtccagcgcctgcgcgctggc
gagctcgacctgctgtacgtcgcgcccgaacgcgcgagccagggccatttccgcgatctg
ctgtcgcagtgccgcatttctctgttcgcgatcgacgaggcgcattgcgtgtccgaatgg
gggcacgatttccggcccgactatcgcctgctgcgcccgctgatggaccaattcgcggac
gtgccgcgcctcgcgctgaccgcgacggcggatgcgcacacccggtccgacatcctgacc
caactggggatcgcgcccgacggcctcatcgtcgcggggttcgaccggcccaacatccgc
tacaccattcgtccgcgagactcgctgacgcagcagctgcgacgcctgctcgcggagaac
cccggccccggcatcgtctacgcgcagacccgcgccgcgaccgagcggctggccgagtcc
ttatccgacggaaaacgcgaagtgcgctgctaccatgcgggcctgccggctgaggtacgc
gcggcgaaccaagcggcgttcgtcgcgagcgagaacatggtgatctgcgccacggtcgcc
ttcgggatgggaatcgacaagcccgacgtgcgcttcgtcgcgcatgcgggcctgcccaag
tcgatcgagtcctattaccaggaaaccggccgcgccgggcgcgatggcgacccggcatcc
gcggagctattctggggtgcggacgatttcgccaaggcacgcatgcgcatcggcgaggtc
ggcgaggcccgccagcagggcgagcgcacgcggctcgcggcgcttggcgcgctggtcgag
actgccggatgccgccgcgcgatcctgctgcgccatttcggcgagaacccgcccgagacc
tgcggcaattgcgacaactgcctgaaccctcccaaggcgatcgacgcgacggtggtggcg
cagaaatacctctctgccgtcgcgcgcacgcggcagatgtacggcgcgggctatgtcgaa
agcatcctcaccggccagtcgagcgaacgcagccggtcgcaggggcacgacaagctgtcg
gtcttcgggatcgtcgagggggaggaagccgcgctgctcaagccagtccatcgcgcactg
ctggtgcgcggcgcgctgctgccgaccgagcatggcgggatgatgctgggccccgaggcg
cggggttttctcaagggtgaacaaccgctcgatctggtcattccgcccaagcgggcaggc
ggaaagcgcggcagccgggcaggctcgggtcaggcgctcaaccccgtggacgatcctctg
ttcgacgcgctgcgcgcgctgcggcgcgacatcgcgaaggaaaaccagattccgccctac
gtcatcttccacgattcggtgctgcgcgacatggccggcctgcgcccgcagacccgcgcc
ctgctgggcgaattgcccggcataggggcgaagaagcttgaggcctatggggacgcgttt
ctggaggtgatccgccagcacgagcgctag
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