Corynebacterium incognita: H0194_05310
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Entry
H0194_05310 CDS
T09952
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cik
Corynebacterium incognita
Pathway
cik03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H0194_05310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cik03400
]
H0194_05310
Enzymes [BR:
cik01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H0194_05310
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H0194_05310
DNA repair and recombination proteins [BR:
cik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H0194_05310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_19
Motif
Other DBs
NCBI-ProteinID:
QNE90382
UniProt:
A0A7G7CS16
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All DBs
Position
1152421..1153233
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AA seq
270 aa
AA seq
DB search
MPEGHVIHRLANILNAEFRSSPVAVSSPQGRCAAEAALLDGTRIDYAEARGKHLFIHFAA
NVPEHIVYIHLGLIGSLRFEDPESSWGQQRLRIATATQAAILRGPQWCRAITDDEYSLAL
SKIGEDPIRDDADPEALWPRVHRSRRSIASLLMDQKLFAGVGNIYRAETLFRQGLSPFIS
GSNLDRANFDAIWDDLTTLMAQGVIDGRIDTVRPEHTPEAMGRAPRKDDHGGEVYVYRRA
GLPCYQCGTPIAVQTMEGRNLFWCPTCQPQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggacacgtcattcaccgccttgccaacattctgaacgcggagtttcgcagc
tccccggtggccgtgtccagcccgcaagggcgttgtgcggccgaggcagcgcttctcgac
ggcacgcgcatcgactacgcggaggcacgcggcaaacacctgttcatccacttcgccgcc
aacgtcccggagcacatcgtctacatccaccttggtctcatcggctctttgcgcttcgaa
gaccccgaatccagctggggccagcagcgcctccgcatcgccaccgcgacccaagccgct
atcctccgcggtccgcagtggtgccgggccattaccgacgacgagtatagcctcgcactc
agcaagatcggcgaggatcccatccgcgatgacgccgaccccgaggcactgtggccgcgg
gtgcaccgctcgcgccgcagcatcgcgtcacttctcatggaccagaaactgttcgccgga
gtgggcaatatctaccgcgccgaaacactgttccgccaagggctttcaccatttatttcc
ggcagcaacctcgaccgcgccaacttcgacgccatctgggacgacctcaccaccctcatg
gcccagggcgttatcgacggccgcatcgacaccgtgcgccccgaacacaccccggaggcc
atggggcgcgccccgcgcaaagacgatcacggcggcgaagtctacgtctaccgtcgcgcg
ggcttgccctgttaccaatgcggcacacccatcgccgtgcagaccatggaggggcgcaac
ctgttctggtgccccacctgccagccccagtaa
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