Corynebacterium incognita: H0194_06125
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Entry
H0194_06125 CDS
T09952
Name
(GenBank) ATP-dependent RNA helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
cik
Corynebacterium incognita
Brite
KEGG Orthology (KO) [BR:
cik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cik03019
]
H0194_06125
Enzymes [BR:
cik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
H0194_06125
Messenger RNA biogenesis [BR:
cik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H0194_06125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
Helicase_RecD
AAA_30
AAA_11
ParA
Flavi_DEAD
ResIII
AAA_19
AAA_16
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QNE88688
UniProt:
A0A7G7CM72
LinkDB
All DBs
Position
complement(1323490..1325847)
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AA seq
785 aa
AA seq
DB search
MDFNLSAIGAGLPVAERIGALPGLLEDANTLVVQAPPGTGKTTLVPPALANALGSGGKVI
VTAPRRVAVRAAARRLAQLDGTRVGERVGYSIRGEHKPGQLVEFVTPGVLLRRLLSDPAL
DGVAAVAIDEVHERQLDSDLVLAMALEVAQLREDFALVAMSATLNAAAFAEHLGAQVLST
PAVTHPLDVRYSPHPERGTRGRAYYEHLAALAAAEVRAQGHSALVFVPGVREVEDTLAAV
PADIPALPLHGRLDSEAQDAALNDDGTPRIVVATSIAESSLTVPDVRIVVDSGLSRVPRR
DAARGMTGLVTITGAKSTMDQRAGRAGREGPGTVVRAFAAADYANAAPDITPDIATSDLT
QACLQLACWGTPRGEGLPLVTPPPPPALADAQSTLRTLGAVAEDGTVTEMGRRLATLPAD
PRLGRALLECGPAAAEVVAVLADSPSGDIARAQAPKREVERLRSLVSGGTGCAEAGVVTG
LAFPQRIARRQGDNDCLLVSGTRAYLPPDSALRGREWLAIAEVTRASAREGRAGATIRAA
AAIDEAAALEIIGVTEELRAHLVDGAVRGKKVRRAGAIELSATPVAVPPEHAAQALAAGI
REEGLGLFTWSDKATALRERLDFLHAQLGEPWPDVAAADPALWLGPELDAMAHGTPAKKV
DLYPALQRLLPWPEASRLDELAPERLEVPSGSRPRISYGEGRPVVRVKLQECFGLEESPR
CAGIAVQFHLLSPAGRPLAVTDDLRSFWSGPYAGVRAEMRGRYPKHPWPEDPWTAPATAR
TKNRM
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaacctttcggccattggcgccggcctgccggtggcagagcgcatcggcgcg
ctgccgggattgttggaggacgccaacaccctggtggtccaggccccgcccggcaccggt
aaaaccacgctggtgccgcccgctttggccaatgcgttgggtagcggtggcaaggtgatc
gtcaccgcgccacggcgcgtggcggtgcgggccgcggcgcgtcgtctagcgcagctggac
ggcacgcgtgtgggcgagcgcgtggggtattccatccgcggcgagcacaagcccggccag
ctcgtggagtttgtcaccccgggcgtgctgctgcggcgcttgttgtccgatcccgctctt
gacggcgtggccgccgtggccatcgacgaggtgcacgagcggcagctggattccgatctg
gtactcgccatggcattggaggtggcgcagctgcgcgaggacttcgcgctggtggcgatg
tccgccacgctcaacgccgcggcgtttgccgagcacctcggcgcgcaggtcctctccacc
ccggcggtcacgcacccgctcgacgtccgctactccccgcacccggagcgcggtacgcgt
ggccgcgcctactacgagcacctggccgcgctcgccgccgccgaggtgcgcgcgcagggc
cactcggcgctcgtgttcgtgcccggtgtgcgcgaagtcgaggacactctggccgccgtc
cccgcggacatcccggcgctgccgctgcacggccgcctggacagcgaggcacaagacgcg
gcgcttaacgacgacggcaccccgcgcatcgtggtggccacgtccatcgcggagtcctcg
ctcaccgtgcccgacgtgcgcatcgtcgtggattcgggtctctcgcgcgtgccgcgccgc
gacgccgcccgcggcatgaccggcctggtcaccatcaccggcgcgaagtccaccatggat
cagcgcgccggccgcgccggccgtgagggccccggtaccgtcgtgcgcgccttcgccgcc
gctgactacgccaacgccgccccggacatcaccccggacatcgccacgtcggatctcacg
caggcctgcctgcagctcgcgtgctggggcaccccacgcggcgagggcctcccgctggtc
actcccccaccgccacccgcgcttgccgacgcccagtccaccttgcgcaccctaggcgcc
gtggcggaggacgggacggtgacggagatggggcgtcgcctagcaaccctgcccgccgac
ccccgcctgggccgcgcgctgctggagtgcgggcccgccgcggcggaggtggtagcggtg
ctcgcggactcgccgtccggagacatcgcccgggcgcaggcgccgaagcgcgaggtagag
cgcctgcgctcactggtgagcggcggtaccggctgcgccgaggcgggcgtggtgacgggc
ctggcgttcccgcagcgcatcgcaagaagacagggcgacaacgactgtttgttagtctcc
ggaacacgcgcgtacctgccgccggactcggcgctgcggggccgagagtggttggcgatc
gcggaggtcactcgggcgtcggcacgcgaaggccgggcgggcgcgacgatccgggccgcg
gcagccattgacgaagccgcggcgctggagattatcggcgtcaccgaggagttgcgtgca
caccttgtcgacggcgcggtgcgcggcaagaaggtgcgccgcgcgggtgccatcgagctg
tccgcaaccccggtggcggtgcccccggaacacgccgcgcaggcgctggcggccgggatc
cgcgaggagggactggggctatttacctggtcagataaggcgacggcgctgcgcgagcgg
ctcgatttcctgcacgcgcagctcggcgagccgtggccggatgtggccgccgcggacccg
gcgctgtggctggggccggagctggacgccatggcgcacggcaccccggcgaagaaggtg
gacctgtaccccgcgttgcagcgcctgttgccgtggccggaggcgtcgcgcctggacgag
ctcgcgcccgagcggctggaggtgccatccggctcgcgcccgcggatctcctacggcgag
ggccgcccggtggtgcgggtcaagctgcaggagtgcttcgggctggaggaatcgccgcgc
tgtgcgggaatcgctgtccagtttcacctgctctcgcccgcgggaaggccgctggcggtg
accgatgacctgcgcagcttctggtccgggccgtatgccggggtacgcgcggagatgcgc
gggcgctaccccaagcacccgtggccggaggacccgtggaccgcgccggcgacggcacgg
acaaagaaccggatgtga
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