Corynebacterium incognita: H0194_06710
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Entry
H0194_06710 CDS
T09952
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cik
Corynebacterium incognita
Brite
KEGG Orthology (KO) [BR:
cik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cik03032
]
H0194_06710 (topA)
03400 DNA repair and recombination proteins [BR:
cik03400
]
H0194_06710 (topA)
Enzymes [BR:
cik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H0194_06710 (topA)
DNA replication proteins [BR:
cik03032
]
Prokaryotic type
DNA Topoisomerases
H0194_06710 (topA)
DNA repair and recombination proteins [BR:
cik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H0194_06710 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QNE88783
UniProt:
A0A7G7CMG7
LinkDB
All DBs
Position
1444386..1447235
Genome browser
AA seq
949 aa
AA seq
DB search
MAGTNGQGKTLVIVESATKAKKIQPYLGDGYIVEASVGHIRDLPRGAADVPAKYKKESWA
RLGVNPEKDFEPLYVVSADKKKKVADLKAKLKQCDQLYLATDPDREGEAIAWHLLEVLKP
KVPVRRMVFNEITKSAILEAAANTRELDENLIDAQETRRILDRLYGYEVSPVLWKKVMPR
LSAGRVQSVATRVIVERERERMAFRRAEYWDLSAELLKEATSFEARLVGLEGRRVAQGRD
FGDDGQLKGDAVVLDQARAESLAAELKGKPMQVAAVEQKPYTRRPYAPFMTSTLQQEAGK
RLHFTSERTMRIAQRLYENGHITYMRTDSTSLSKQGLNAARSAARDIYGEEFVAASPRTY
DRKVKNSQEAHEAIRPAGESFATPGQLSSQLDTEEYKLYDLIWKRTVASQMEDAKGTSMK
VTITSEKAEFSATGRTIDFPGFLRAYEDGKQDNKGEARLPQLAQGDALDVEKITADGHTT
NPPARYTEATLVKKMEDLGIGRPSTYASIIKTIQDRGYVLSRGNALVPSWVAFAVVGLLE
NSFTELVDYDFTSSMEDELDAIAAGNEDRTQWLNGFYFGNAELHNDHKAASIARHGGLKS
LIDVNLEQIDARAVNSLKLFDDAEGRPVFVRVGRYGPYIERQVGVKDGEPEYQRANISEA
TTPDELTLEVAEKLFATPQGGRELGENPDNGRMIVAKEGRFGPYVTEQVRDDEREKAEAE
ALEVVARERAAEDEQRAAEGKRKKNWETKTAEKQKDKRIAEYVEDKLKPKTASLFKGMEP
SSVTLEEALKLLSLPREVGVDPSDGEVITAQNGRYGPYLKKGSDSRSLASEEQIFTVTLD
EARRIYAEPKRRGRQAAQPPLKQLGDNDVSGKPMTVKDGRFGPYVTDGVTNASLRKGDKP
EAMTDARANELLSERRAKEAGQPKKATKKTAKKPSPRTKRVVKAGAKKK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
gtggcaggtacaaacggtcagggaaaaaccctggtcatcgtagagtcggctaccaaggcg
aagaagattcagccttatctgggcgatgggtacatcgtggaggcctccgtaggccatatc
cgggatctgccacgcggggctgccgacgtgcctgccaagtacaagaaggagtcgtgggcg
cgcttgggcgtgaacccggagaaggacttcgagcccctgtacgtggtgagcgccgacaaa
aagaagaaggtcgcggacctcaaggccaagctgaagcagtgcgatcagctctacctcgca
acagaccccgaccgcgagggcgaggccatcgcgtggcacctgctcgaggtcctcaagccc
aaggtgccggtgcgtcgcatggtgttcaacgagatcaccaagtctgcgatcctggaggcc
gcggcgaatacccgcgagctggatgagaacctcatcgacgcccaggagacccgccgcatc
ctggaccgcctgtacggctacgaggtctcgcccgtgctgtggaaaaaggtcatgccgcgc
ctgtccgccggccgcgtgcagtccgtggccacccgcgtcatcgtggagcgggagcgcgag
cgcatggccttccgtcgcgccgagtattgggacctgtccgcagagctgctcaaggaggcc
acctccttcgaggcgcgcctggtgggcctggagggccgccgcgtggcccagggccgcgac
ttcggcgacgacggccagctcaagggcgacgcagtggtgttggatcaggcgcgcgccgag
tcgctggcggcagagcttaagggcaagccgatgcaggtggcggccgtcgagcagaagcca
tacacccgccgcccctacgcgccatttatgacctccacgctgcagcaggaggcgggcaag
cgcctgcactttacctccgagcgtacgatgcgcatcgcgcagcgtttgtacgaaaacggc
cacattacttatatgcgtacggactccacttcgctgtccaagcagggcctcaacgcggct
cgttcggcggcgcgggatatctacggcgaggagtttgtcgcggcgtcgccacgcacctac
gaccgcaaggtgaagaactcccaagaggctcacgaggccatccgtcccgcgggcgagtcc
tttgccaccccggggcagctgtccagccagttggacaccgaggagtacaagctctacgac
ctcatctggaagcgcaccgttgcctcccagatggaggacgcgaagggcacctccatgaag
gtcaccatcaccagcgagaaggcggagttctccgccactggccgcaccattgacttcccc
ggcttcctgcgtgcctacgaggacggcaagcaggacaacaagggtgaggcgcgcctgccg
cagctggctcaaggtgacgcgctggacgtggagaagatcaccgcggacggccacaccacc
aacccgccggcgcgctacaccgaggcgaccctggtgaagaagatggaggacctcggcatc
gggcgaccgtccacctacgcctcgattatcaagaccattcaggatcgcggctacgtgctc
tcgcgtggcaacgcactcgtgcccagttgggtggcgttcgccgtggtgggcctgctggaa
aacagcttcaccgagctcgtggactacgacttcacctcgtccatggaggatgagctggac
gccatcgccgccggcaacgaggaccgtacgcagtggctcaacggcttctacttcggcaac
gcggagctgcacaacgatcacaaggcggcgtcgattgcgcgccacggcggcctgaagtcg
ctcattgacgtcaacctcgagcagatcgacgcccgcgcggtgaactcgctgaagcttttc
gacgacgccgagggccgccccgtcttcgttcgtgtcggccgctatgggccctacatcgag
cgccaggtgggtgtgaaggacggcgagccggagtaccagcgcgccaacatctccgaggcc
accaccccggacgagctcaccctggaggtggcggagaagctgttcgccaccccgcagggt
gggcgcgagctgggcgagaacccagacaacggtcgtatgatcgtggccaaggaggggcgc
ttcggcccgtacgttaccgagcaggtgcgtgacgacgaacgcgaaaaggctgaggccgag
gccctcgaggtcgtcgcccgcgagcgcgccgccgaggacgagcagcgcgccgccgagggc
aagcgcaaaaagaactgggagaccaagacggcggagaagcaaaaggataagcgcatcgcc
gagtacgtcgaggacaagctcaagcccaagacggcgtcactgttcaagggaatggagccc
tcctcggtcaccttggaggaggcgctcaagcttttgtccctgccacgtgaggtgggtgtg
gatccttccgacggcgaggtcatcaccgcccagaacggtcgctatggcccgtacttgaag
aagggctcggactcgcgctcgctggctagcgaggagcagatcttcacggtcaccttggac
gaggcgcgccgcatctatgcggagccgaagcgccgcggccgccaggccgcgcagccgccg
ctgaagcagctgggcgataacgacgtttccggcaagcccatgaccgtcaaggacggccgc
ttcgggccgtacgtcaccgacggcgtcaccaatgcctcgctacgcaagggcgataagcca
gaggccatgacggacgcgcgcgccaacgagcttctttcggagcgccgcgccaaggaggcc
gggcagccgaagaaggccaccaagaagacggcgaagaagcccagcccgcgcactaagcgc
gtggtaaaggctggggcgaagaagaagtag
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