Corynebacterium incognita: H0194_07310
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Entry
H0194_07310 CDS
T09952
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cik
Corynebacterium incognita
Pathway
cik03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cik00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H0194_07310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cik03021
]
H0194_07310
03400 DNA repair and recombination proteins [BR:
cik03400
]
H0194_07310
Enzymes [BR:
cik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H0194_07310
Transcription machinery [BR:
cik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H0194_07310
DNA repair and recombination proteins [BR:
cik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H0194_07310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QNE88886
UniProt:
A0A7G7CMS0
LinkDB
All DBs
Position
1573694..1577689
Genome browser
AA seq
1331 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKEVEDDANAEIAERAAKLEAD
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWNTFLKLAPKQMIIDESI
YEELVDRYEDYFTGGMGAEAIQTLIRGFDLDAEAEELREIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVSGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMDKTEDEVGGQ
GGYKPADDNGIAQGVYSSYAEAIMARDRGVLGMQAPIKVRLSHLRPPEEIEAEQFPDGWE
KGQIWMADTTLGRIMFNELLPWNYPYLEGVMVRKGGGSNKVLLGDVINDLANKYPMITVA
QVLDKMKDAGFYWATRSGVTITMDDVLVLPNKTEVLESYEKEAERIERKYWEQGALTERE
RYDRLVELWKDATDTVGTAVEDMYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRLGVRVPIGEEVSEGVFERHDLWETSASGRVVASDVKDSEGNVVAEAGADLTEELT
DKLVAAGITDIKVRSVLTCQTPAGVCAKCYGKSMASGHLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDNVVYEKLSKRQGLAQVRRPMESNPDAMIERSLKDGDHVATGDRLMRGAADPHDVLE
VLGRRGVEKHLIDEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVIDSGTTEFLPGTLVDL
SEAKQVNATQVAEGGAPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
KLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLDEEFSF
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaacctcttcgacgagcttcgcatcggccttgccactgccgacgacatc
cgccgttggtccaagggcgaggttaagaagccggagaccatcaactaccgcaccctgaag
ccggagaaggacggcctgttctgcgagcgcatcttcggtcctacccgcgactgggagtgt
gcttgtggtaagtacaagcgcgtccgctacaagggcatcatctgtgagcgctgtggtgtc
gaggtgaccaagtccaaggtgcgtcgtgagcgcatgggccacatcgagctcgccgctccg
gtgactcacatctggtacttcaagggcgttccgtcccgcctgggctaccttctggacctt
gctccgaaggatctagagcgcatcatctacttcgctgcgaacatcatcaccagcgtggat
gaagaggctcgccacaacgaccagtccactctggaagccgagatgctcctggagaagaag
gaagttgaagacgacgccaacgccgagatcgctgagcgcgccgccaagctcgaggccgac
ctggccgagctggaggccgccggcgccaaggccgacgcccgccgcaaggtgcagaacgct
gcggacaaggagatgcagcacatccgcgagcgcggcgagcgcgaggtcgcccgcctggac
gagatttggaacaccttcctcaagctcgctccgaagcagatgatcatcgacgagtccatc
tacgaagagctcgtggatcggtacgaggactacttcaccggcggcatgggtgctgaagcc
atccagaccctcatccgtggcttcgacctggacgccgaggccgaggaactgcgcgagatc
atcaacaacggcaagggccagaagaagatgcgtgcgctgaagcgcctgaaggtcgttgct
gccttccagcgctccggcaacgatccagccggcatggtgctggattgcatcccggtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgcgacctccgacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctg
ggcgcaccagagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtggacgcc
ctgttcgacaacggccgtcgcggccgcccggtctccggtccgggcaaccgcccgctgaag
tcgctgtctgacttgctcaagggcaagcagggtcgtttccgtcagaacctgctgggtaag
cgcgtggactactccggtcgttccgtgattatcgtgggtccgcagctcaagctgcacgag
tgtggtctgccgaagctcatggccctcgagctgttcaagccgttcgtcatgaagcgcctg
gtggaaaacgactacgcgcagaacatcaagtccgccaagcgcatggtggagcgtcagcgc
cctgaggtgtgggacgtgctggaagaggcaatttccgagcacccagtgttgctgaaccgc
gcaccgaccctgcaccgcctgggcatccaggccttcgagccgaagctcgttgagggtaag
gctatccagctgcacccgctggcgtgtgaggcgttcaatgctgacttcgacggtgatcag
atggcagtccacctgccgctgtccgccgaggctcaggctgaggcccgcgtgctgatgctg
tcttccaacaacattctgtccccggcgtccggtaagccgctggctatgccgcgtctggac
atggtgaccggcctgtacttcctcaccatggataagactgaggacgaggtcggcggccag
ggcggctacaagcctgccgacgacaacggcatcgcacagggcgtgtactcgtcctatgcc
gaggccatcatggctcgcgaccgcggcgtgctgggcatgcaggcaccgatcaaggtccgc
ctctctcacctgcgtccgccagaggagatcgaggcggagcagttccctgacggttgggag
aagggtcagatctggatggctgacaccaccctgggccgcatcatgtttaacgagctgctg
ccgtggaactacccgtaccttgagggcgtcatggtccgtaagggtggcggctccaacaag
gtcctgcttggcgacgtcatcaatgacttggccaacaagtacccgatgatcaccgtggct
caggtgctggacaagatgaaggatgccggtttctactgggcaacccgttccggcgtgacc
atcaccatggacgacgttctggttctcccgaacaagaccgaggtgctggaatcctacgag
aaggaagccgagcgcatcgagcgcaagtactgggagcagggtgcgctgaccgagcgtgag
cgctacgaccgcctggttgagctctggaaagacgccacggacaccgtgggtacggccgtc
gaggacatgtaccccgacgacaacccaattccgatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggactctggccggtatgaagggcatggttgtgaactccaagggt
gactacatcacccgtccgattaagacctccttccgcgagggcctgtcggttctggagtac
ttcaacaactcccacggctcccgaaagggtctggccgataccgcgctgcgtaccgcagat
tccggttacctcacccgtcgtcttgtcgacgtcgcgcaggatgtcatcgtccgcgaagag
gactgtggcacccgcctgggtgtgcgcgtcccgatcggcgaagaggtcagcgagggcgtc
ttcgagcgtcacgacctgtgggagacctctgcgtctggccgtgttgtggcttccgacgtc
aaggattccgagggcaacgttgtcgccgaggccggtgcggatctcactgaggaactcacc
gacaagctggtcgcagctggcatcaccgacatcaaggtgcgctcggtgctgacctgccag
accccggcgggcgtctgtgcgaagtgctacggcaagtccatggcatctggccacctggtg
gacatcggcgaggccgtcggcatcgtcgctgcccagtccattggtgagccgggtacccag
ctgaccatgcgtaccttccaccagggtggtgtcggtggcgacattaccggtggtctgccg
cgtgtccaggagctcttcgaggctcgtaacccgaagaaccgcgctccgatcgcgtccgtg
gatggcaccgtgtccctgtccgacgagggcaacttctggaccctgaccatcaccccggac
gatggttcggacaacgtggtctacgagaagctgtctaagcgccagggcctggctcaggtg
cgtcgtccgatggagtccaacccggacgccatgattgagcgctcgctcaaggatggcgac
cacgttgccaccggcgatcgcctcatgcgcggtgctgctgacccgcacgacgtcctggag
gtcctgggccgccgcggcgtcgagaagcacctgatcgacgaagtgcaggccgtgtaccgc
acccagggtgtggctatccacgacaagcacatcgagatcatcatccgccagatgctgcgc
cgcggcaccgtcatcgactcggggaccaccgagttcctgccgggcaccctggttgacctc
tccgaggccaagcaggtcaacgcaacgcaggtcgctgagggtggcgccccagccgagctc
cgctcggagatcatgggcatcaccaaggcctcgctggctaccgagtcttggctgtccgcc
gcgtccttccaggagaccacgcgtgtgcttaccgacgccgcaatcaacaagcggtccgat
aagctcatcggcctcaaggagaacgtcatcatcggtaagctcattccggccggtacgggt
atctcgcgttaccgcaacatctcggttaagccgaccgaggctgcgcgcaatgctgcgtac
tccattccgacctatggtgactccatctatggcgatgatggcttcggtgaattcaccggt
gcttctgtcccgctggatgaggagttcagtttctaa
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