KEGG   Corynebacterium incognita: H0194_08975
Entry
H0194_08975       CDS       T09952                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cik  Corynebacterium incognita
Brite
KEGG Orthology (KO) [BR:cik00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cik03400]
    H0194_08975
Enzymes [BR:cik01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     H0194_08975
    5.6.2.6  RNA 3'-5' helicase
     H0194_08975
DNA repair and recombination proteins [BR:cik03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    H0194_08975
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_4th_Lhr WHD_3rd_Lhr WHD_2nd_Lhr DEAD Helicase_C ResIII DUF6406 HTH_IclR
Other DBs
NCBI-ProteinID: QNE89179
UniProt: A0A7G7CNL3
LinkDB
Position
1923384..1928411
AA seq 1675 aa
MATDAAGANGGGDVLDRFRPQVAAWFREVFSAPTPVQRGAWSAIADGSNALVVAPTGSGK
TLAAFLWALNNLTVRAGQAALPMELDDAAGAGGASDGVRVLYISPLKALGVDVERNLRVP
LTGIARVAQRMGVEEPDITIGVRSGDTPQSERNRQVRRPPDVLITTPESAYLMLTSKAAG
ILETVDTVIIDEIHALAGTKRGVHLALTLERLEALTGGFQRVGLSATVRPLEAVANFLGG
GRPVEIIAPPAEKQWALDVHVPVDDMSDLPTPEVGSTIGELTVDDPLGIASPVNDAAPIA
EDSALPAAKSIWPFIEEELYREVMAHRSTLVFVNSRRTAERVTSRLNELYAHEHDPEALS
AASRRDPAQLMKQTDTVGQAPALIARAHHGSVSKDERALTEDMLKAGELRAVVATSSLEL
GIDMGAVDLVVQVESPPSVASGLQRVGRAGHTVGAVSQGSFYPKHRADLVQSALTVSRMR
AGLIERLHTPENPLDVLAQQTVAAVAAAAHRSSGAHPGSITADEWYEQVRRAWPYRNLSR
DVFDSVIDLVSGTYPSTDFAELRPRVVYDRMSGELTARPGAQRVAVTSGGTIPDRGMFGV
FLAGTEVSGVGGSKAPRRVGELDEEMVYESRVGDVFTLGASSWRIEDITRDQVIVTPAPG
HTGRLPFWNGDQAGRPFELGKALGAFRRDLLAADAAVGAEHGGVDKLLPDLDERARANTL
AYLREQQEATGVVPDETTLVLERFRDELGDWRVILHTPFGRGVNAAWALAVGKRVAEETG
MDPQAVAGDDGIVLRLPEADTEPSGALFVFDPDDIAAEVTDQVGSSALFASRFRECAARA
LLLPRRNPGKRAPLWQQRQRAEQLLDVARKYPTFPIILETVRECLQDVYDLPALTEVMED
LQHRRVRVVEVTTDQPSPFASTLLFNYTGAFMYEGDTPLAEKRAAALALDPALLAKLLGT
VELRELLDADIIDEVHAQLQRISDGRRARNAEELADLLRVLGPVPVADLDLHTDVPGLDP
RPLLDAGRAMRVRIAGREHLAQTLDAPLLRDGLGIPVPPGVAAQVATVNDAVEQLLSRWA
RTRGPFVLRDAAEAFGLSVSVTHSVLSGLIERGEVIEGRFRQGVDEQEYCAADVLKIIRS
RSLAAARAATQPVSQTAFARFIPDWQQVAGLRQRPQLRGADGVFAVLEQLAGVRLPVSAW
ESLVLPARVAGYDPLMLDELTSGGEVLIKGAGTAGAADPWVMLLPTDYAEQLAPVGEDPF
ADRSTLQLSPLQESILEVLGRGGGFLFNDLMHEVRGAGDELGLTVGQSSPEQLRDALWDL
VDAGLVAPDSFAPLRARLSMGTGGRGGAGRGGAAHKAKRRPTRSRLRMGRTSFAQTQRAQ
QTPPDMTGRWALAVRGDGGNATARSVAHGEAWLDRYGVVTRGSVQAEDVIGGFAMAYKVL
SGFEESGKALRGYVVEGLGAAQFSTPALIDRLRGMDDSVDAGGWPSGSTEPAVYLLAAAD
PANAYGAALPWPERDGANTGRNTGGLSRGAGAVVVLVDGVLVAHLTRGGRTLTTFADAAP
SGIERTESAGYIVDALREAVASRRMAPFVIEKVNGEAIFESPWADLLRGAGAGITPRGVR
ISGQAPAPRRPAGRGSTSYASPGGRSVAEALEDLSFDDEPFEPPRNPGGGFRPRR
NT seq 5028 nt   +upstreamnt  +downstreamnt
atggctactgatgccgcgggggccaacggtggcggagacgtgttggatcgcttccgcccc
caggtagccgcgtggtttcgggaagtgttctccgcgccgaccccggtacagcgtggcgcc
tggtcggcgattgcggacggctcgaacgccttggtggtggcgcccacaggttccggtaag
accctcgcggcgtttttgtgggcactcaataacctcaccgtgcgcgccgggcaggcggcg
ttgccgatggagcttgacgacgccgcgggtgccggcggcgcgagcgatggcgtgcgggtg
ctgtatatctccccgctcaaggcgctgggggtggacgtggagcgcaatctgcgggtgccg
ctcacgggcatcgcgcgggtggcgcagcggatgggcgtggaggaaccggacatcaccatc
ggcgtgcggtccggagataccccacagtccgagcgcaaccggcaggtgcgccgcccaccg
gatgtgctgattacgacgccggagtcggcgtatctcatgcttacgtccaaggcggcgggc
atcctggagacggtggataccgtcatcatcgacgagattcacgcgctggccggcaccaag
cgcggcgtgcacctggcgctgacgctggagcgcctggaggcgctgaccggcggtttccaa
cgcgtgggcctgtcggcgacggtgcgcccgctcgaggcggtggccaacttcctgggcggc
ggtcgcccggtggagattatcgccccgcccgcagagaagcagtgggcgctcgacgtccac
gtgcccgttgacgacatgtcggatttgcccacgccggaggtcggctccaccatcggcgag
ctcactgtggacgacccgctggggatcgcctcaccggtgaacgatgctgcgcctatcgca
gaagattccgcgctgccggcggcgaaatccatctggcccttcattgaagaagagctctac
cgggaagtgatggcgcaccgttccacgttggtgttcgttaactcccggcgcaccgcagag
cgggtgaccagccggctcaacgagctctacgcccacgaacacgacccggaggctctctcc
gcggccagccgtcgcgacccggcgcagctgatgaagcagaccgacaccgtcggtcaagcc
ccggcgcttatcgcccgcgcgcaccacggctcggtctccaaggacgagcgggccctgacg
gaggacatgctcaaggcaggggagctgcgcgcggtggtggccacgtcctcactggagctc
ggcatcgacatgggcgcggtggacctggtggtccaggtggaatctccgccgtcggtggcg
tctggattgcagcgcgtgggccgcgccgggcacaccgtaggtgcggtgtcgcagggctcg
ttttacccgaagcaccgcgcggacctcgtgcagtccgcgctgaccgtctcccgtatgcgc
gccggtctcatcgagcggctgcacaccccggagaacccgctggacgtcttggcccagcag
accgtggccgcggtggccgccgccgcgcaccgcagttccggcgcgcaccccggcagcatc
accgccgacgagtggtacgagcaggtccgccgcgcctggccgtaccggaacctgtcccgc
gatgtctttgactcggtcattgacttggtcagcggcacgtacccgtccacggacttcgcg
gagctgcgcccgcgcgtggtctatgaccgcatgagcggcgagctcaccgcgcggccggga
gcacagcgcgtggccgtgacctccggcggcaccatcccggaccgcggtatgttcggcgtg
ttcctcgccggtactgaggtttccggcgtcggcggctccaaggctccgcgccgcgtcggc
gagctggacgaggaaatggtctacgagtcccgcgtgggtgacgtattcaccctgggcgcg
tcgagttggcgtatcgaggacatcactcgcgaccaggtcatcgtcacgcctgcgcccggg
cacaccggccgcctgccgttctggaacggcgaccaggccgggcggcccttcgaactgggc
aaggccctgggggccttccggcgcgatctcctggccgctgacgccgcagtgggtgcggag
cacgggggcgtcgacaagctcttgcccgatctggacgagcgggcgcgcgccaacaccctg
gcctacctgcgcgagcaacaggaagccaccggcgtggtcccggacgagaccacgctggtg
ctcgagcgtttccgcgacgagctgggggactggcgcgttattctgcacacgcccttcggc
cgcggggtcaacgccgcgtgggcgttggcggtgggcaagcgcgtggcggaggagaccggc
atggacccgcaggcggtggcgggcgacgacggcattgtgctgcgcctgcctgaggccgac
acggagccctccggcgcgctgtttgtctttgacccggacgatatcgccgccgaggtcacc
gaccaggtaggcagctccgcgctgttcgcctctcggtttcgggaatgcgccgcccgcgcc
ttgctgctgccgcgacgcaaccccggcaagcgtgcaccgctgtggcagcagcgccagcgc
gccgagcagctactcgacgtcgcgcgcaaatacccgacgttccccatcatcttggagacc
gtgcgcgagtgcctgcaggacgtctacgacctgcccgcgctgaccgaagtgatggaggac
ctgcagcaccgccgcgtacgcgtggtggaggtgaccacggaccaaccctcgccgttcgcg
tccacgctgctgtttaactacaccggcgcgttcatgtacgaaggcgatacaccgctggcg
gaaaagcgcgccgccgcgctcgcgttggacccggcgctgctggccaaattgctgggcacg
gtggagctgcgcgagctcctggacgccgacatcatcgacgaggtccacgcccagctgcaa
cgcatctccgacgggcgccgcgcccgcaacgctgaggaactcgcggatctgcttcgggtg
ctaggccccgtgcctgtcgccgacctggacctgcacacggacgtccccggcctggatccg
cgcccgcttctcgacgccggccgggccatgcgcgtacgcatcgccgggcgcgaacatttg
gcccaaaccctggacgcgccgctgctacgcgacggccttggcatccccgtccctcccgga
gtggcggcgcaggtagccacggtcaacgacgctgtggagcagctgctctctcgctgggcg
cgtactcgcggccccttcgtgctgcgcgacgccgcggaggccttcggcctgtcggtatcg
gtgacgcactcggtcctctccggtctcattgagcgcggcgaggtgattgagggccgtttc
cgccagggcgtcgacgagcaggaatactgcgcggcggacgtcctcaaaattattcgctcc
cgctcgctggcggccgcccgcgcggccacgcagccggtatcccagaccgcgttcgcacgt
tttatcccggactggcagcaggtggcgggcctgaggcagcgcccacagctgcgcggcgcc
gatggcgtgttcgcggtgctggaacagctggccggggtgcggctgccggtcagcgcctgg
gaatcgctggtcctgcccgcgcgcgtggcgggttatgacccgctgatgctggacgagctc
acctccggcggtgaggtgctcatcaagggtgcgggcaccgcgggcgctgcggatccgtgg
gtgatgttgctgcccacggactacgccgagcagctcgcaccggtcggtgaggatcccttt
gctgaccgctccacactccagctgagccctctccaggaatccatcctggaagtgcttggc
cgcggcggcggcttcctgttcaacgacctcatgcacgaggtgcgcggggccggcgatgag
ttgggactcaccgtgggccagtcctccccggagcagctccgcgacgccctgtgggacctg
gtggatgcgggcctggtggccccggattccttcgcgccgctgcgcgcccgcctgtcgatg
ggcacgggcggccgtggcggtgccggccgcgggggcgcggcgcacaaggccaagcgccgt
ccgacccgctctcgcctgcgcatgggacgcacgtccttcgcgcagacccaacgggcgcag
cagaccccgccggacatgactgggcgctgggcgctggcggtccgcggcgatggcggcaac
gcgacggcccgttcggtagcgcacggcgaggcctggctggaccgctatggcgtggtcacg
cgcggcagcgtgcaggctgaggacgttatcggcggttttgctatggcgtacaaggtgctc
tccggctttgaggaatccggcaaggccctgcgtggctacgtggtggaagggctgggcgcg
gcacagttttccacgcccgcgctcattgaccggctgcgcgggatggacgactccgtggac
gccggtggctggccgtcgggaagcacagaacccgcggtctatctcttggccgccgccgat
cccgccaacgcctacggcgccgccctgccgtggccggagcgcgacggcgcgaacaccggc
aggaacaccggcggcctttcccggggcgcgggcgcggtggtggtactcgtcgacggcgtg
ctggtcgcgcacctcacccgcggcgggcggacgctgaccacgttcgccgacgccgcgccg
tccggcatcgagcgcaccgagagcgccggctacatcgtggacgccctgcgtgaggcagtg
gcgtcgcgcaggatggcgccgttcgtcattgaaaaggtcaacggcgaggccatctttgaa
tccccgtgggcagacctgctgcgcggggctggggcggggattaccccgcgcggggtgcgc
atctccggccaggcaccggccccacggcgtcccgccgggcgggggagcaccagctacgcg
tcgccgggcggccgctcagtggccgaggccctggaggacctgagcttcgacgacgagccg
ttcgaaccaccgcggaatcctggcggcgggttccgcccgcggcgctag

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