Corynebacterium incognita: H0194_09990
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Entry
H0194_09990 CDS
T09952
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cik
Corynebacterium incognita
Pathway
cik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H0194_09990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cik03019
]
H0194_09990
03009 Ribosome biogenesis [BR:
cik03009
]
H0194_09990
Enzymes [BR:
cik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H0194_09990
Messenger RNA biogenesis [BR:
cik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H0194_09990
Ribosome biogenesis [BR:
cik03009
]
Prokaryotic type
rRNA helicases
H0194_09990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
PIN_9
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QNE89352
UniProt:
A0A7G7CP36
LinkDB
All DBs
Position
2147326..2149392
Genome browser
AA seq
688 aa
AA seq
DB search
MSITDNATGGVNEPDVENSQSESQETSQNEQPQADVQSQDNGVTDARVSEQQADTGQGNA
EPSEDTGAESEDSANESTQGFDTLGLPDEVIKAVEKVGFTTPSPIQQETIPLLMEGRDVV
GLAQTGTGKTAAFALPVLSRIDAAARYPQALVLAPTRELALQVADSFQSFADHLGRIEVL
PIYGGQAYGIQLSGLRRGAQIVVGTPGRVIDHLEKGSLDISQLKYLVLDEADEMLNMGFQ
EDVERILADTPDDKQVALFSATMPNGIRRISKQYLNDPAEVTVKSETRTNTNITQRFLLT
PHRAKMDAFTRILEVIDYDGIIVFVRTKHETENVAEQLRAQGYSAAAINGDIAQNQRERT
VDQLKDGRLDILVATDVAARGLDVERISHVVNFDIPNDTESYVHRIGRTGRAGRTGEAIL
FVTPRERRMLRNIERVTKARLEEMDLPSVDEVNTARKAKFTQKITEKLDDSQMEMFRGML
RKYSETNNVAMDDIAAALAVALQGDTEFLMKEQPKHKRDKFDRDKFDRDDRRGGRRDRDD
RRGGRDRGPRRPDGDFESYRIAVGRRHNVRPGAIVGAIANEGGLSSGDFGRITITENRTI
VELPKNLDPSVLSRLSDTRIQGQLINIEKDTGRPPRDRDDRGGRGFGGRGRGRDDRGGDR
RDDRRGGRGGRGFGGGRDRDDRRGSWRD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgtgaacgagccggacgtagaaaatagtcag
tcggaatctcaggaaacttcgcagaacgagcagccacaggctgacgttcaatctcaggac
aacggcgtcaccgatgcccgcgtgtctgagcagcaggccgacaccggccaggggaatgcg
gaaccttctgaggacaccggcgctgagtccgaggactcggccaacgaaagtacccagggg
tttgacactctcggcctgccagacgaggttattaaggccgtcgaaaaggttggtttcacc
accccttcaccgatccagcaagaaaccatcccactgctgatggaaggtcgcgacgtcgtc
ggcctcgcgcagaccggtacgggcaagaccgcggcgtttgcgctgccggtgctgtcgcgt
atcgacgccgctgcgcgctacccgcaggcattggtcctggctccgacccgtgagctggcc
ttgcaggttgccgactcgttccagtcgtttgcggatcacctcggacgcatcgaggtgctg
ccgatttacggtggccaggcctacggcatccagctgtccggcctgcgccgtggtgcgcag
atcgtcgtgggcactccggggcgcgttatcgaccacctggagaaggggtccctggacatc
tcccagctgaagtaccttgttctggacgaggctgacgagatgctcaacatgggcttccag
gaagacgtggagcgcatcctggcggatacgccggatgacaagcaggtggctttgttctcc
gcgacgatgccgaatggcatccgccggatttccaagcaatacctgaacgacccagccgag
gtcaccgtgaagtcggagacccgtaccaacacgaacatcacccagcgtttcttgctgacc
ccgcaccgcgccaagatggatgcgttcacccgcatcctcgaggtcattgactacgacggc
atcatcgtgttcgtgcgcaccaagcatgagacggagaacgtcgcagagcagttgcgtgcg
cagggctacagcgctgctgccattaacggcgacatcgcgcagaaccagcgtgagcgcacc
gtcgaccagctcaaggacggccgcctggacatcctcgttgctaccgatgttgcggcgcgt
ggcctggacgttgagcgtatctctcacgtggtcaacttcgacattccgaacgacactgag
tcctatgtccaccgcattggccgcaccggccgtgcaggccgtaccggcgaggcaatcctg
ttcgtgactcctcgtgagcgccgcatgctgcgcaacattgagcgtgtcaccaaggcccgc
ctggaagaaatggatctgccttccgtcgatgaggtgaataccgcccgcaaggctaagttc
acccagaagatcaccgagaagctcgatgattcccagatggaaatgttccgcgggatgctg
cgtaagtactcggagaccaacaacgttgcgatggacgatatcgctgctgcgctggcagtt
gccctgcagggtgacactgagttcctgatgaaggagcagccaaagcacaagcgcgacaag
ttcgaccgggacaagttcgaccgcgatgaccgtcgcggtggccgccgtgaccgtgacgac
cgtcgcggtggccgcgaccgcggaccgcgccgcccggatggtgacttcgagtcttaccgt
attgcggtgggccgtcgccacaacgtgcgaccaggcgccatcgttggcgctatcgcgaat
gagggcggcttgtcctccggcgactttggacgcatcacgattacggaaaaccgcaccatc
gtggagctgccgaagaacttggatccttccgtgttgagccgcttgtccgatactcgtatc
cagggccagctcatcaacattgagaaggacactggacgcccgccacgtgaccgtgatgac
cgcggtggccgtggcttcggcggacgcggacgtggccgtgatgatcgcggtggagatcgc
cgtgatgaccgtcgtggtggccgcggtggccgtggcttcggcggcggacgcgaccgtgac
gaccgccgaggtagctggcgcgactag
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