Chryseobacterium indoltheticum: EG358_00665
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Entry
EG358_00665 CDS
T06757
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cil
Chryseobacterium indoltheticum
Brite
KEGG Orthology (KO) [BR:
cil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cil03016
]
EG358_00665
Enzymes [BR:
cil01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EG358_00665
Transfer RNA biogenesis [BR:
cil03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EG358_00665
Prokaryotic type
tRNA splicing ligases
EG358_00665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AZA72362
UniProt:
A0A381F5U5
LinkDB
All DBs
Position
complement(137773..139164)
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AA seq
463 aa
AA seq
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MGNLKLKGKDILKLGYPNNQSVNIALEVMKRNFATKNIHHVKSLLKEILVNPENFEKDLT
FGQIAEALLSSKKTEKRMLNTNRTSFQIFGNNISDEAKNQLYTALKLPIATQGALMPDAH
SGYGLPIGGVLAVENAVIPYGVGMDIGCRMSLSILDTPISYLNGARDKYEKALAEHTKFG
MYETHKSHVDHEIFDRDTFDLIPILRRLKGKAIKQMGSSGGGNHFVEFGEVEITEEDEQI
NLPKGKYLGILSHSGSRGLGAEIAQYYSRVATEQCPLPKEAQNFAWLDLNTHLGLEYWTA
MNLAGDYASACHDDIHRRLVKAVGGRVKAKIENHHNFAWKEIHNGKEMIVHRKGATPANE
NELGMIPGSMTAKGFIVRGKGNPDSLNSASHGAGRAFSRGECRNLFTQNDIKKELKLKNV
TLMGGNAEEAPMAYKDINEVMNAQSELVDILGTFQPRIVRMDK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatttaaaacttaaaggaaaagatatattaaaattaggctatccaaataatcaa
agcgtaaacatcgctttggaagtcatgaaaagaaattttgccacgaaaaatattcatcat
gtaaaatctcttttaaaggaaattctggtcaatccggaaaattttgagaaagatttaacc
ttcggacaaatcgcagaagccttgctttcatccaagaaaacagaaaaaagaatgctcaac
acaaaccgaacttcttttcagattttcggaaataatatttcggatgaagcaaagaatcaa
ttgtacaccgcattgaaacttccaattgcaacgcaaggagctttgatgcctgatgcacac
agtggttacgggcttccgattggtggagttctcgccgtagaaaatgctgtaattccttac
ggagtcggcatggatatcggctgtagaatgtcgctcagtattttggatacgccgatttca
tatctgaacggagctagagataaatatgaaaaagcgcttgccgagcataccaaattcggg
atgtatgaaacgcataaatctcacgtcgatcacgaaattttcgacagagacacattcgac
ttaattccgattttgagacgattaaaaggaaaagccatcaaacaaatgggaagttccggc
ggcggaaatcattttgtggagttcggggaagttgaaattacggaagaagacgaacagatc
aaccttccaaaaggaaaatacctcggaattctttcacacagcggttcgcgtggtttggga
gcagaaatcgctcagtattattcgagagttgcgacagagcaatgtcctttgccaaaagaa
gcccaaaacttcgcctggctagatttgaatacgcatctcggcttagaatactggacagcg
atgaatcttgcaggagattacgcttcggcttgtcacgacgacattcaccgaagattggta
aaagcagttggcggaagagtgaaagctaaaatcgaaaaccatcacaatttcgcctggaaa
gaaatccataacggaaaagaaatgattgttcacagaaaaggcgcaactccggcaaatgaa
aatgaattgggaatgattcccggatcgatgactgcaaaaggttttattgttcgcggaaaa
ggaaatccggattcattgaactcagcttcacacggagcaggacgagctttttcaagagga
gaatgcagaaatcttttcactcaaaatgacattaagaaagaattaaaactcaaaaatgtc
actttgatgggcggaaatgccgaagaagcaccaatggcgtacaaagacatcaacgaagtc
atgaatgcgcaaagcgaattggtagatattcttggaactttccagcctagaattgtgagg
atggataagtaa
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