Chryseobacterium indoltheticum: EG358_02805
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Entry
EG358_02805 CDS
T06757
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cil
Chryseobacterium indoltheticum
Pathway
cil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EG358_02805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cil03021
]
EG358_02805
03019 Messenger RNA biogenesis [BR:
cil03019
]
EG358_02805
Transcription machinery [BR:
cil03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EG358_02805
Messenger RNA biogenesis [BR:
cil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EG358_02805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_25
AAA_22
Rho_N
AAA
PAT1
Motif
Other DBs
NCBI-ProteinID:
AZA72752
UniProt:
A0A381F797
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All DBs
Position
588375..590240
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AA seq
621 aa
AA seq
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MFNIETLRSKSVTELTKILKDLGVKVARTSNENDKIFAILDFQASNPKVTKDYFNTTETP
AAVTEEQPAEKVVKPAPKKAAPKRTAKPKAVTEPKETPPATAPEEIKTEEAPAEEVKAEA
ETKESAPEEKPASSNNRQKRKRVSPPAQNSEIEVKGTLELPLNIDSQPSAPAQAKEERPK
RPQQAQQGQPQNQKGQNNPQQNSGNSQNQNQNQNRNQNNNQNPNQNQNRQQHAERPERQE
EQHEQKKEFSFDGMVSIEGVLEILPDNYGFLRSSDFSYISSPDDVYVSTAQIRNFGLKTG
DTVRGIVRLPKEGEKYFSLLKPIEVNGRDLAYIKDRVAFEYLTPLFPEEKFNLSGDNSTM
STRIVDLFAPIGKGQRAMIVAQPKTGKTMLLKDIANSIAANHPEVYMMVLLIDERPEEVT
DMERSVNAEVIASTFDEAADKHVKVANLVLAKAQRMVECGHDVVILLDSITRLARAYNTV
TPASGKVLSGGVDANALHKPKRFFGAARKIENGGSLTIIATALIDTGSKMDEVIFEEFKG
TGNMELQLDRKIANRRIYPAIDLVSSSTRRDDLLLDEVTSQRMWIFRKYLSEMNPIEAME
FVNKNIRGTLNNEEFLMSMNR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacatagaaacgttaaggtcaaaatctgtaacggaattgactaaaatcttaaaa
gatttgggcgttaaggttgcaagaaccagcaatgaaaatgataaaatttttgctattcta
gattttcaggcttccaaccctaaagttacaaaagattatttcaataccacagaaacccct
gctgctgttacagaagaacaaccggcagagaaggtagtaaaacctgctcccaaaaaagct
gctccaaaaagaacggcaaagcctaaagcggtaacggagccaaaagaaacaccgcctgca
actgcaccggaagagataaaaacagaagaagcccctgctgaagaagtaaaagctgaagct
gaaactaaagaaagtgctcctgaagagaaaccagcttcttctaataacaggcaaaaaaga
aaaagagtttcgcctccagcacaaaatagtgaaattgaagtaaaaggaacattagaactt
cctttaaatatagattctcagccaagtgcacctgcacaagctaaagaagaaagacctaaa
agaccgcaacaagcacagcaaggtcagcctcaaaatcaaaaaggtcaaaataatccacaa
caaaacagtggaaattctcaaaatcagaatcaaaaccagaaccggaatcaaaataacaac
cagaatcctaatcaaaatcagaacagacagcaacatgctgaaagacctgaaagacaagag
gagcaacacgaacagaagaaagagttcagcttcgacggaatggttagtattgaaggggtt
ttggaaattttaccagacaactacggatttttacgttcatcagacttctcttatatttcg
tcaccggatgacgtgtatgtttcgacagcacagatcagaaattttggtttaaaaaccgga
gatacggtaagaggaattgtaagacttccgaaagaaggcgaaaaatatttttcattatta
aagcctattgaagttaacggacgtgatttagcatatattaaagatcgtgtagcttttgaa
tatcttacgccattattccctgaagagaaatttaatctttcgggagataattctacgatg
tcaacaagaattgtagatcttttcgcacctatcgggaaagggcaaagagcaatgatcgtt
gctcagccaaaaaccggtaaaacaatgttgcttaaagatattgccaattctatcgcagcc
aatcaccctgaagtttatatgatggttcttttgatcgacgaacgtcctgaagaagttacc
gatatggaaagaagtgtgaatgcagaggtaattgcttctacatttgatgaagctgcagat
aagcacgtaaaggttgctaatttagttttagcaaaagcccaaagaatggtagaatgtggc
catgatgtggtgattcttttagattcaattacaagattggcaagagcatataatacagta
actcctgcatccgggaaagtactttccggtggtgttgatgcaaatgctcttcacaaacca
aaaagattcttcggagctgcaagaaaaattgaaaatggagggtcgttaacgattattgca
accgctttaattgatacaggctctaaaatggatgaagttatttttgaggaattcaaaggt
accggaaacatggaacttcaattagacagaaaaattgccaacagaagaatttatcctgct
atcgatttggtttcttcaagtacaagaagagacgatttattgcttgacgaagtaacttct
cagagaatgtggattttcagaaagtatctttcagaaatgaatcctatcgaagcaatggaa
tttgtcaacaaaaacatcagaggaactttaaataatgaagagttcttgatgtcaatgaac
agataa
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