Chryseobacterium indoltheticum: EG358_07780
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Entry
EG358_07780 CDS
T06757
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cil
Chryseobacterium indoltheticum
Pathway
cil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EG358_07780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cil03019
]
EG358_07780
03009 Ribosome biogenesis [BR:
cil03009
]
EG358_07780
Enzymes [BR:
cil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EG358_07780
Messenger RNA biogenesis [BR:
cil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EG358_07780
Ribosome biogenesis [BR:
cil03009
]
Prokaryotic type
rRNA helicases
EG358_07780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AZA73658
UniProt:
A0A381FB69
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All DBs
Position
1634406..1636139
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AA seq
577 aa
AA seq
DB search
MNLFTETNLSPDILKAIGELGYESPTEIQKQTIPFILSDIRDLIALAQTGTGKTAAFSLP
ILDMIDDTSRKIQFLVLCPTRELCLQITKDIKNYSKYMQNIKTTAVYGGSSIVDQIRSLK
EKPQIIVGTPGRVIDLINRKALDFSEIHWLVLDEADEMLSMGFKDELETIMRETPETKQT
FLFSATMSKEVERISKNYLTKPHRISVGSINEVKKNIKHEYYVAGYRHKKEALKRLIDSN
PNQYSIIFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVDSLTHVVHYSLPDDPEVFVHRSGRTGRAGKDGISISLIKPEESRKLKQIKSV
TKIDIAEARIPTGEDIVKAQVAGVFENLLEVQKDFFEFDDSLIPDLSEFTKEELVHKLLQ
FQLKDLALYYKDKHDILEQKMSSRDDDRGGRDRDRGRDRDRGRDRDRDRGPRGDRDGRSD
RGERRGDRGGKPRQKDENMTRFFFNLGKKDQLKKLDVLEIINKATSSKGNKRAEIGNIEI
LEKFSFFEIEKSYKNELLGNIQSMKFKGKDMRAEEAN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggagaccaatttaagtcctgatatccttaaggccattggcgaactg
ggttacgaaagcccgacagaaatccaaaaacagactatcccttttattctttcagatatt
cgcgatctaatcgcacttgcgcagacagggacaggcaaaacagcagcgttttcgcttccg
attttggatatgattgacgatacgagtcgcaaaatccaatttttggtgctttgtccgaca
cgagaattatgtcttcagattacaaaagacatcaaaaattattcaaagtacatgcagaac
atcaaaactacagcagtttacggtggaagcagtattgtggatcagattcgttctttgaag
gagaagccgcagattattgtgggaactccgggaagggtgatcgatttgattaacagaaag
gcattagacttttcagaaattcactggttggttttagacgaagcagatgaaatgctttct
atgggtttcaaagacgagttggaaaccattatgagagaaactcctgaaacaaaacaaact
ttcttgttctcggcaacgatgagcaaagaagtggagagaatttcaaaaaattatttgaca
aaacctcaccgtatttctgtgggttctattaacgaagttaagaagaatattaagcacgaa
tattatgtggctggttaccgtcataaaaaggaggctttgaagagattgatcgattcaaac
ccgaaccaatattcaattattttctgtagaacaagaatggaaactcaggaagttgccgat
ttcttgatgcagaatggttatgcagcagatgctcttcatggtgatctttctcaggcgcag
agagatacggtaatgaagaaattcagactgaaaaatattgatattttggtagcaactgat
gttgcagcaagaggattagacgtagattctttaactcacgttgtacattattctttacct
gatgatcctgaagtattcgttcacagaagtggtagaacgggtagagccggaaaagatggt
atctctatttctttgattaaacctgaagaaagcagaaaattgaagcagataaaatcggtt
actaagattgatatcgctgaagctagaattcctacaggtgaagatatcgtaaaagctcag
gttgcaggtgttttcgaaaacttacttgaagtacagaaagatttctttgaatttgatgat
tcattgattcctgatctttcagaatttacaaaagaagaattggtgcacaaattacttcag
ttccaacttaaagatcttgctttgtattacaaagacaagcatgatattctggagcagaaa
atgagcagcagagatgatgacagaggtggaagagaccgtgacagaggaagagatcgtgac
agaggaagagatagagaccgcgacagaggtcctagaggagatcgtgacggaagaagcgac
agaggagaaagaagaggtgatcgtggtggtaaaccaagacaaaaagatgagaacatgact
agatttttcttcaatcttggtaaaaaagatcagttgaaaaaactagatgttttagaaatc
atcaataaagctacttctagcaaaggaaacaaaagagcggaaatcggtaatattgaaatt
cttgaaaaattctcattctttgagattgaaaaatcttataaaaatgaacttttaggaaat
atccaatcgatgaagtttaaaggaaaagacatgagagctgaagaagctaactaa
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