KEGG   Chryseobacterium indoltheticum: EG358_07850
Entry
EG358_07850       CDS       T06757                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
cil  Chryseobacterium indoltheticum
Pathway
cil03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EG358_07850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cil03019]
    EG358_07850
Enzymes [BR:cil01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EG358_07850
Messenger RNA biogenesis [BR:cil03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EG358_07850
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 AAA_19 ERCC3_RAD25_C Helicase_C_2 Cas3-like_C_2 P-loop_SecA AAA_22 HEM4 UvrD-helicase
Other DBs
NCBI-ProteinID: AZA73670
LinkDB
Position
complement(1647138..1648406)
AA seq 422 aa
MLFTDLKLIKPILDALQKEGYEKPTPIQEQAIPSILEHRDVLGTAQTGTGKTAAFAIPIL
QNLTERKGPKSNHIKALILTPTRELAIQIEESFNAYGKNLPLKQLVIFGGVKQGNQVAAL
RKGVDILVATPGRLLDFIAQGIISLKNLEIFVLDEADRMLDMGFVHDVKRIIKLLPQRRQ
TLFFSATMPTEIQKLADSILNTPIKVSVTPISSTAETIKQSVYFVDKDKKLDLLSHILEN
NIKESVLVFSRTKHGADKIARKLQSANIATEAIHGNKSQNARQNALNNFKSGRTRVLVAT
DIAARGIDIDELKYVINFELSDVAETYVHRIGRTGRAGAEGSSLSFVDGLDLLNLKDTEK
LIGMKIPVVKDHPYHTDNLVVEKRDSNNKPFTPRPKPANAGQQRKDTGFKKPKNKNNFSR
NK
NT seq 1269 nt   +upstreamnt  +downstreamnt
ttgttatttacagacttaaaacttattaagcccatcttggatgcgcttcaaaaagaaggt
tacgaaaaaccaacacctattcaggaacaagcgattccatcaattttagaacacagagat
gttctgggtacagcacaaacaggaaccggtaaaactgctgcttttgccatcccgattcta
cagaatcttacagaaagaaaaggcccaaaaagtaatcatataaaagcattaattcttact
ccaacaagagaattagctattcaaattgaagaaagcttcaatgcatacggaaaaaattta
ccattaaaacagttggtgattttcggtggtgtaaaacagggaaatcaagttgcagctttg
agaaaaggtgttgatattttggtagcaactcctggaagattgttagattttattgcacag
ggaattatttctcttaaaaatcttgaaatttttgttttggatgaagccgacagaatgcta
gatatgggttttgtacatgatgtaaaaagaattattaaacttttacctcaaagaaggcaa
actcttttcttttctgcaacaatgccgactgaaattcaaaaattagcagattctatcctg
aatacaccaataaaggtatctgtaacaccaatttcttcaactgcagaaacaattaaacaa
tctgtttattttgttgataaggataaaaaactggatcttctttctcacattttagaaaac
aacatcaaagaatctgttctggtattctcaagaacaaaacatggtgctgacaagattgct
agaaaacttcagtccgcaaacatagcaacagaagcgattcacggtaacaaatctcaaaat
gcgagacaaaatgctttgaataattttaaatcaggaagaacgcgtgttttggtagctaca
gatattgcagcgagaggtattgatattgatgaactgaaatatgttatcaactttgagctt
tctgatgttgcagaaacctacgttcaccgtatcggaagaacaggccgtgcaggagctgaa
ggaagttctttatctttcgttgatggtttagatttacttaatcttaaagataccgaaaaa
ctgatcggaatgaaaatccccgttgtaaaagatcatccttatcacaccgataatttggtt
gttgagaaaagagattctaacaataaaccttttacaccgagacccaaaccggcaaatgca
ggtcaacaaagaaaagatacaggttttaaaaaaccaaagaataaaaataacttttccaga
aataaataa

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