Chryseobacterium indoltheticum: EG358_12220
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Entry
EG358_12220 CDS
T06757
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
cil
Chryseobacterium indoltheticum
Pathway
cil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cil00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EG358_12220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cil03021
]
EG358_12220
Transcription machinery [BR:
cil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EG358_12220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AZA74476
UniProt:
A0A381FH09
LinkDB
All DBs
Position
complement(2636248..2637114)
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AA seq
288 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVELITADEEVDLAQRIRAGDRAALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEEDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALNTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNTRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaataaccaagcaggttaccaacagggaaaccgcttcactagacaag
tatttgcaggaaattggtaaagtagaactaattacggcagacgaagaggtagatttggcg
cagagaattcgtgcaggtgacagagccgcattggaaaaattaatcaaagccaaccttcgt
ttcgtagtttctgtatctaagcagtaccaaaaccaaggtctttctttgcccgatttaatt
aatgaagggaatttaggattaatgaaagctgcaaaaagatatgatgaaacaagaggtttc
aaatttatctcttatgcagtttggtggattcgtcagtcgattttacaggctttggcagag
caatcgagaattgtaagattgccattgaacaaaattggatcgatcaacaaaatcaacaaa
gcttacgctcaccttgagcaggaaaacgaaagaccaccttctccggaagaattggctgaa
gttcttgacatgagcgaggaagatatcaaagaatctatgaaaaactccggaagacatttg
tctatggatgcgcctttggtagaaggtgaagattctaacctttatgacgttttacgttct
ggagaatctccaagcccggataaagatttgatgcttgaatctcttcaaattgagattgaa
agagcattaaacactctaacaccgagagaggcagatttggtaagattgtatttcggattg
aacggaaaacatccaatgactttggaggaaatcggtgaaacttttgatcttaccagagaa
agagttcgtcagattaaagaaaaagcaattaaaagactaaaacacaataccagaagtaag
attttgaaatcttatttaggtaaataa
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