Chryseobacterium indoltheticum: EG358_13595
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Entry
EG358_13595 CDS
T06757
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cil
Chryseobacterium indoltheticum
Pathway
cil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EG358_13595 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cil03019
]
EG358_13595 (recQ)
03400 DNA repair and recombination proteins [BR:
cil03400
]
EG358_13595 (recQ)
Enzymes [BR:
cil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EG358_13595 (recQ)
Messenger RNA biogenesis [BR:
cil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EG358_13595 (recQ)
DNA repair and recombination proteins [BR:
cil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EG358_13595 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
AZA74734
UniProt:
A0A381FH98
LinkDB
All DBs
Position
complement(2911670..2913874)
Genome browser
AA seq
734 aa
AA seq
DB search
MSAKKANLSGELKKYFGFSTFKGQQEEIINNLLNGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSETGVAHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLIKEDYLEFLKDVKISFVAIDEAHCISEWGHDFRPEYRNLKQIIDKIADVPVIALTA
TATPKVQDDIQKTLGMTNALVFKESFNRANLFYEVTPKVNIDKEIVKFINKNKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKVRVANQDKFLMEEADVIVATIAFGMGIDK
PDVRFVIHYDFPKSLESYYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGETFDPVNGDGAKMCDNASNPPKLKDATDDLRKT
LELINETKEKFKSKDLISVIVGKENAVTKSYKLEQSSFFGFGKSEKDNYWKTILRQATVQ
NFLQKDIETYGVLKISEKGKKVLTGDLKDPFLIAEDREFDLSQTKAESDQVQMQSSGGLD
QNLFALLKDLRKKVAKKHQIPPYTVFMDPSLEDMTVQYPITVEEIAKIYGVGEGKAKKYG
KEFADFIAKYVEDNNIERTQDMVLKQVANKSSHKVFIIQSTDKKIDLEDIARAKNLSMND
LLKEMERIVYQGTKLNIDYYIEDNFDEDVVDDFMEFMNESESDSMKVLLDEFGDELSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaaaaaagccaatttatcaggcgaattaaaaaaatacttcgggttttctacc
tttaaaggacagcaggaagagatcattaataatctcttaaacggaaaagatattttcgta
ctgatgcctacaggaggcggtaagtcgctgtgttatcagcttcctgctcttatttctgag
ggtacggcaatcgttgtttcaccgcttattgccctgatgaaaaatcaggtagatgcagta
aatggtctttcttctgaaaccggtgtagcccacgttcttaattcttctcttaacaaaact
cagaccaaacaggtctttgatgatataaaaagcggtaaaacaaagcttctttacgtagct
ccggaatctttgatcaaagaagattatctggaatttctgaaagatgtaaaaatatcgttc
gttgcaatcgatgaagcgcactgtatatcagaatgggggcatgatttcagaccagaatac
agaaatttaaagcaaatcattgataaaattgcagatgttccggtaattgctttaaccgca
actgcaaccccgaaggtacaggatgatattcaaaaaactttaggaatgaccaatgctttg
gtgtttaaagaaagttttaacagagctaatttattttacgaagtcactcctaaagttaat
attgataaagaaattgtaaagtttatcaataaaaataaagggaaatcgggaattgtttac
tgtttaagccgaagaaaagtggaagaatttgcccagcttcttcaggtaaatggaatcaat
gcacttccgtatcatgccggtcttgatcagaaagtgagggtcgccaatcaggataagttt
ttgatggaagaagcggatgttattgtagcaacaattgcatttgggatgggaatcgataaa
cctgatgtacgtttcgtgattcattacgattttccaaaatctctggaaagttattaccag
gaaacgggtcgagcaggccgtgatggaggagaaggatattgcttggccttctatgatcct
aaagatattgagaaattagagaaattcttggctcaaaaacctgtttctgaaagagaaatc
ggtttgcagcttttaaatgaagtagtcggctatgctgagacttctatgagccgaagacag
tatatattatattattttggtgaaactttcgatccggtaaatggtgacggagcaaaaatg
tgtgacaatgcatcaaatccgccaaagctgaaagatgctacagacgatttaagaaaaaca
ctggaattaatcaacgaaacaaaagaaaaatttaaatcaaaagatttgatttctgtaatt
gttggaaaagaaaatgctgttacaaagtcctataaactagagcaaagttcatttttcggg
tttggaaaatcagaaaaagataattactggaaaacaattctaagacaggcgaccgtacaa
aattttttacagaaagacatcgaaacatacggtgttttaaaaatctctgaaaagggtaaa
aaagtcttaaccggtgatttaaaagatccatttttaatcgctgaagatcgtgaatttgat
ctttcacaaacaaaagctgaaagtgatcaggtacagatgcagtcgagtggaggtttagac
caaaatttatttgcccttttaaaagaccttagaaaaaaagtagccaaaaaacatcagatt
ccaccttatacggtttttatggatcctagtttggaagatatgactgtgcaatatccgatt
actgttgaagagattgctaaaatctacggagttggagaaggaaaagccaaaaaatacgga
aaagagtttgccgattttatagcaaaatatgttgaagacaacaatatagagcgtactcag
gatatggttttgaagcaggttgcgaataaatctagccacaaggtttttatcattcagagt
accgataaaaaaattgatcttgaagatatcgcaagagccaaaaacctttcgatgaatgat
ttattaaaggagatggagcgtattgtttatcaggggacaaaactaaacatcgattattat
atcgaagataattttgatgaagatgttgtagatgattttatggaatttatgaacgaatct
gaaagcgacagcatgaaagttttgcttgatgagtttggtgatgagctttctgacgaagaa
gtaaggatgctgagaataaagtttatcagcgatgttgccaattaa
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