Carya illinoinensis (pecan): 122274149
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Entry
122274149 CDS
T08745
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00730
Thiamine metabolism
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
122274149
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122274149
Enzymes [BR:
cill01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
122274149
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Motif
Other DBs
NCBI-GeneID:
122274149
NCBI-ProteinID:
XP_042939057
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All DBs
Position
1:complement(41089791..41094764)
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AA seq
722 aa
AA seq
DB search
MRIGPPIPVPQCRCLLATSPDAQRSPSFSSHFTRGTNLLCPSQEKLHYVQVRKRPGGICA
SLSERGPEYHSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFNVSRTGGHLGS
SLGVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDKMHTIRQTNGLSGFTKRSE
SEFDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVVAVIGDGAMTAGQAYEAMNNAGYLDS
DMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM
HELAAKVDEYARGMIGGSGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKSTKTTGPVLI
HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSKAPTQSYTTYFAEALIAEAEVDKD
IVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCTIYSSFLQR
AYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELF
HMVATAAAIDDRPSCFRYPRGNGIGVQLPTRNKGIPIEVGKGRILLEGERVALLGYGTAV
QSCLGAASLMESHGLSLTVADARFCKPLDRALIRSLAKSHEILITVEEGSIGGFGSHVAQ
FMALDGLLDGKTKWRPLVLPDRYIEHGSPTDQLAEAGLTPSHIAATVFNILGQTREALEI
MS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcggccctcccatacctgtcccacaatgtcggtgcttgctggcaacatctcct
gacgctcaaagatcaccttcgttctcatctcactttactcggggaacaaatctgctatgc
ccatctcaggaaaagctccattatgtacaggtcaggaaaaggccaggtggaatttgtgca
tcactatcagagagggggccggagtatcattcacagagaccaccaactcccctcttggac
accataaactatccgattcacatgaaaaatctatcaactaaggagttgaaacaacttgca
gatgaactgcggtcagatgtcatctttaatgtttccagaactggaggtcacctaggctcg
agcctgggtgttgtcgagctcactgtggctctccattacgtttttaatgctcctcaagat
aagatattatgggatgttggtcatcagtcttacccacacaagatcctgactgggagaaga
gataagatgcatactataaggcagacaaatgggttatcaggattcacaaagcgctcggag
agtgaattcgattgctttggtaccggccacagttctaccaccatctcagcaggactggga
atggctgtagggagggatctgaagggaaggaataataatgttgttgctgttatcggtgat
ggcgccatgacagcggggcaagcttatgaagccatgaacaacgccggttaccttgattct
gacatgattgttattctcaacgacaataaacaggtttctttacctactgctaatctagat
gggcccataccacctgtgggagctttgagcagtgctctcagtaggttgcagtctaacagg
cctcttagagaattaagagaggttgccaagggagttacaaaacaaattggcggtccaatg
catgaactggctgctaaagttgatgaatatgctcgtggaatgatcggcggctctggatca
actctgttcgaagagcttggactctattatataggtcctgttgatggtcacaatatcgat
gatctagttgccattctcaaagaggtcaaaagtactaaaacaacaggtccggttctgatc
cacgttgtgactgagaaaggccgaggatacccgtatgcagaaaaagcagcggacaagtat
catggagttgccaaatttgatccagcaactggaaagcaattcaagtccaaggctcctaca
cagtcatacacaacatacttcgcagaagctttgattgcagaagcagaagtggacaaagat
attgttgcaatccatgctgcaatgggaggtggaacaggcttgaatctcttccttcgccgt
ttcccaacaagatgttttgacgttgggatagcagaacagcatgccgttacttttgcagca
ggtctggcctgtgagggcatcaaaccattctgtacaatctactcatctttcctgcagagg
gcttatgaccaggtagtacatgatgtggatctgcagaagttgccagtgagatttgccatg
gacagagctggactggttggagcagatggtcccacacattgcgggtcttttgacgtcacc
tttatggcctgcctccccaacatggtggtcatggctccttctgatgaggcagagctgttt
cacatggttgccactgctgctgcaatagatgaccggcccagttgtttccgctacccaaga
gggaatgggattggtgttcagctaccgacgaggaataagggcattcctattgaggttgga
aaaggcaggatactgctagaaggggaaagagtggcactcttgggctatggaacagcagtt
cagagctgtttgggtgcggcatctttaatggaatcccatggcttaagcctaacagttgca
gatgcacgcttttgcaagccattggatcgtgcccttattcgcagcctagcaaaatctcat
gagatcttgattacggttgaagaaggatcaattgggggatttgggtctcatgttgctcag
ttcatggcccttgatggccttcttgatgggaaaacaaagtggagacctctggtcctgcct
gatcgatacatcgagcatggatcgcctactgaccaactggctgaagctggtcttacacca
tctcatatcgcagcaacggtgttcaacatacttgggcaaacaagagaggcactggagatc
atgtcataa
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