Carya illinoinensis (pecan): 122274173
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Entry
122274173 CDS
T08745
Name
(RefSeq) syntaxin-41-like
KO
K08489
syntaxin 16
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122274173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122274173
Membrane trafficking [BR:
cill04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
122274173
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Ortholog
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GFIT
Motif
Pfam:
SNARE
Syntaxin_2
EF-G-binding_N
Prominin
FlxA
DGKD_4H
MCPsignal
Motif
Other DBs
NCBI-GeneID:
122274173
NCBI-ProteinID:
XP_042939091
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All DBs
Position
8:complement(33814449..33818841)
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AA seq
325 aa
AA seq
DB search
MASRNRTIIFRRYRDALKSVRAPASSSPASSLTTSAGGPVIELVSTSLINPNRSYAPLST
EDPGNSSKGALTVGLPPAWVDVSEEIAANVQLARTRMAELAKAHAKALMPSFGDGKEDQR
LIESLSQEITGLIKRSEKKLQRLSAAGPSEDSNVRKNVQRSLATDLQNLSMELRKKQSTY
LKRLRQQKEGQDGVDLEMNLNGNRSTMEDDDLDNMVFNEHQMAKLKKSEALTAEREREIQ
QVVDSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEEGLKQLQKAERTQKHGGM
VRCATVLIIMCFIMLVLLILKEIFL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaggaaccggactattattttcagaagatacagggatgcgttgaagagcgtc
agggctccagcgagctcttcgccggcctcttcattgacgacctcagccggcggtcctgtg
atcgagctggtcagcacctcgcttatcaatccgaatcggtcctacgctccgcttagcact
gaggatccgggtaattcgagtaagggtgcacttactgtgggtctacctccagcttgggtt
gatgtttctgaagaaatagcggcaaatgtccagcttgcacggactagaatggctgagtta
gccaaggctcatgcaaaggcattaatgccttcatttggagatggtaaagaagatcaacgt
ttgatcgagtctctttcacaagagatcactggattgataaagagatcagagaagaaactg
cagaggctttcggcagctggaccttctgaggattcaaatgttagaaagaacgtgcagcgc
tctcttgccactgaccttcagaacctttcaatggagcttcgcaagaaacagtcaacttat
ttgaagcgccttaggcagcaaaaagagggtcaagatggggttgatttagagatgaatcta
aatggaaatagatctacaatggaagacgatgatttggacaacatggtgtttaatgagcat
caaatggccaagctaaaaaaaagtgaggctctcacagcagaaagagagagagagatccaa
caggttgtggactccgtcaatgagcttgctcaaattatgaaggatttgtcggtacttgtg
atagatcagggcaccattgttgacagaatagactacaacattcagaatgtggcgactact
gtggaggaggggctaaagcagctgcagaaggcagagagaacacagaaacacggggggatg
gtgaggtgtgctacggtgctcataatcatgtgctttatcatgttggttctgctaatccta
aaggagatatttttgtga
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