Carya illinoinensis (pecan): 122274202
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Entry
122274202 CDS
T08745
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122274202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122274202
03032 DNA replication proteins [BR:
cill03032
]
122274202
Spliceosome [BR:
cill03041
]
Complex A
U1 snRNP components
Sm proteins
122274202
U2 snRNP components
122274202
Complex B
U1 snRNP components
122274202
U4/U6.U5 tri-snRNP components
122274202
Complex C
U2 snRNP components
122274202
DNA replication proteins [BR:
cill03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
122274202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
DUF2986
Motif
Other DBs
NCBI-GeneID:
122274202
NCBI-ProteinID:
XP_042939143
LinkDB
All DBs
Position
8:12356849..12359448
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AA seq
109 aa
AA seq
DB search
MSRPMDEDATAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM
VLENVREMWTEVPKTGKGKKKAHPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggccaatggatgaggatgccactgctgggaagaatgaggaagaggaattcaac
actgggccactctctgttctgatgatgagtgttaaaaacaacacacaggtgctaattaac
tgccgaaacaacaagaagcttctaggtcgggtgagggcctttgatcggcactgcaacatg
gttctcgaaaatgtcagggagatgtggactgaggtaccgaagactggtaagggcaagaag
aaagcacatcctgtcaacaaagataggtttatcagtaagatgtttcttcggggagactca
gttatcatcgtccttaggaaccctaagtga
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