Carya illinoinensis (pecan): 122274247
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Entry
122274247 CDS
T08745
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122274247
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122274247
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
Lipoprotein_22
Motif
Other DBs
NCBI-GeneID:
122274247
NCBI-ProteinID:
XP_042939202
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Position
8:complement(3293813..3298177)
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AA seq
476 aa
AA seq
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MTTSKENENFNAAVYETDISSTTRTEFPPITTTETQDTGPTESEPPTQNPESDSAPATDH
PAPVATTAAAAVSVDKRWSGWPGDCVFRIIVPVLKVGSIIGRKGDLIKKMCEETRARIRV
LDGAVGTPDRVVLISGKEEPELPLSPAMDAVIRVFKRISGLSEGQDKISGAAFVSFSSFR
MLVASTQALNLIGKQGSLIKSIQEHTGASIRVLSGDEGLLYVAADERIVELQGETFKVLK
ALEVVVGHLRKFVVDHSVLPLFEKNYAAPISQDHVVDVWSDKSSLHAAFQTAITTDYPLS
VSTKRDSVFYDREPLLESQLPPSGRSLYGQDPRFSGVRSSGFARAGAPIITQITQTMQIP
LSYAEAILGLKGFNISLIRRSSGAILTVQESRGRPDEFTLEIKGTSSQVQSAQHMVQEAI
NTHNDNEPVTRSYGGMDDGLRYPYSGATSFPASPFSSQSFGGYESSSLGDYGTFRH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgagtaaagaaaacgagaacttcaacgccgcggtgtacgaaactgacatctcc
tccactactagaaccgaattccctcccatcacaactacggaaacacaggataccggtcca
acagagtccgaacctcccactcagaaccccgagtccgattcagctcccgcaaccgaccat
ccggctccggtagctaccacagccgccgccgcggtttcagtcgataagagatggtcggga
tggcccggagactgtgtgttccggatcatcgtgccggttctcaaggtcggtagcatcatt
ggacgcaagggggatctcatcaagaagatgtgcgaggagactcgtgcccgcattcgcgtt
ctggacggcgccgtcggaactcccgatcgcgttgttctgatatcaggaaaggaagagcca
gagttacctctttcccctgcaatggatgctgtgatacgagttttcaaacgcatctctgga
ctatctgagggccaagataaaatatctggagccgcttttgtttcattttcctcattccgg
atgttagtggcatccacacaagcccttaatttaattggaaaacaaggctcattaatcaaa
tctatacaggagcatactggtgcctctatcagagtattgtcaggagatgaggggctgctc
tatgttgctgcagatgagaggattgtggaattgcagggagaaacttttaaggttctcaaa
gctctagaagtggtagtgggtcacctgaggaagtttgtggttgatcacagtgttcttcct
ctttttgaaaagaattacgctgcgcctatctcacaagatcatgtagtagatgtctggtct
gacaagtcatcacttcacgctgcttttcaaactgcaattaccactgattatcctctctct
gtctctacaaagagggattctgtattctatgaccgtgaacctctcttggagtctcaactc
ccaccctcgggaaggtcactctacggacaagatcctagattttctggagtacgttcttca
ggatttgctcgtgctggtgctcctattattacacagattacacaaacgatgcaaatccca
ctgtcttatgctgaggctatccttggacttaaagggtttaatatctctctcattcgtcga
agtagtggagcaatcttgaccgtgcaagagagcaggggacgacccgatgaattcactttg
gaaattaaaggcacctcatcacaggttcagtcagctcaacacatggttcaggaagctata
aatactcacaatgacaatgaaccagttacaagaagctacggtgggatggatgatggtttg
aggtatccttactcaggcgctacatctttcccggcatctccgttctcctcgcaatcattc
ggagggtatgaatcttcaagtttaggagactacggaactttcaggcattga
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