Carya illinoinensis (pecan): 122274288
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Entry
122274288 CDS
T08745
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122274288
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122274288
microRNA pathway
RISC loading complex
122274288
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
PAZ
dsrm
Motif
Other DBs
NCBI-GeneID:
122274288
NCBI-ProteinID:
XP_042939262
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All DBs
Position
8:complement(18242866..18248772)
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AA seq
780 aa
AA seq
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MNSEIIKEKARLEACNQHREIGALRDSLQERGNEPYIDQQPSYFPPELVGHLPKNSNILY
HCYLMELEQKFAYEIPVHDIVLVLRNKLEAELGSLHFDLDVDRGSLTVNFKYVGVINLST
KQVLLCRRFQKTLLSVLIYHDLKSLNERMDGDILGVETDYLLLPATGKHQRPLIIDWKCV
TSVLFSCKKNDESHLNCSLPKGRARIVQTKDGPVCTCLLQKSLVHTPHTDQVYCTTGILE
LNANSRMQHRRGKITTYKEYYEERHGIKLRFEHESWVSGRHIFRVKNYLQRCRNRKEKEL
SKQSVELPPELCSIVMSPISVNTFYSFSFVPSIMHRVESLLIAANLKKMYSDHYTQNDAI
PISKVLEAITTKKCQEKFDLESLETLGDSFLKYAVTQQLFKTYQDQPEGVLTSKKEKIIS
NAALCEFGCHRRLPGFIRDESFDPKKWIIPGDRLGSALSEELLFNRRKIYIRETRKMESK
TVADVVEALIGAFLSIGGETSALLFMEWLGIKVDFHITPYERPFPIHAEKRLNVRHLESL
LNYSFRDTSLLVEALTHGSMFREIPRDYERLEFLGDSVLDYLMTKHFYYEYPGLSPEQLT
DMRSASVNNECYARSAVKFGLHKHILRDSQELDKQIVKTCNNFEKLSSESTFGWDAETTF
TEVLGDIIESLAGAILVDSGYNKEMVFGSIRPLLEPLITPETPMSHPVKELTELCQKKHY
EMEEINKNRNDNEGLSYITVKVNAKGHLFEHTAKATNGKTAKKLAYKEVLKSLKDKKLKG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgagatcatcaaagaaaaagcccgccttgaagcatgcaatcaacatcgtgag
attggtgcattaagagatagtcttcaagaaagggggaacgaaccttatattgatcagcaa
cccagttatttcccacctgaactggtcggtcatcttccaaagaattcgaatatattgtat
cattgctacctaatggagctggagcagaaatttgcttacgaaattccagttcatgatatt
gtgcttgtcctgagaaataagctagaagctgaacttggaagcttgcattttgacttggat
gttgacaggggtagtttgacagtgaactttaaatatgtaggagtgattaatcttagcaca
aagcaggtccttttgtgcagaagatttcagaaaactcttttaagcgttcttatttatcat
gatttgaaaagtttaaatgagcgtatggatggagatattttgggagttgagactgattat
cttttgctcccagccactggaaagcatcagagacctttgatcatcgattggaaatgtgtt
acttctgtgctattttcgtgtaagaagaatgatgaatctcacttgaattgttctttaccc
aagggtcgtgctcgtattgtacaaaccaaagatggtcctgtatgcacttgcctgcttcag
aagtctttggtgcacacccctcacactgatcaggtgtattgcacaactgggattttggaa
ttgaatgcaaattcacgtatgcagcaccgtcgtggcaaaatcactacttacaaggagtac
tatgaagaacggcatggcatcaagctgcgttttgagcacgaatcatgggttagtgggaga
cacatttttcgggtgaaaaattaccttcaaagatgcagaaatcggaaagagaaagaattg
agtaagcagtctgtcgaattgcctccggaactttgttctatagttatgtcgccgatatca
gtcaatacattttattctttctcatttgttccttcaatcatgcaccgggttgagtctttg
ctcatagctgccaacttaaaaaagatgtattcggatcattacacacaaaatgatgctatt
ccaatttccaaggtcttggaagcaattactacaaagaaatgccaggagaaatttgacttg
gaatccttagaaacgctgggagattcatttctcaaatatgctgtgactcaacagcttttt
aagacctatcaagatcaacccgagggtgtccttacttcaaagaaagaaaaaataatttca
aatgcagctctttgcgagtttggatgtcaccgcagacttccgggatttattcgagatgag
tccttcgatccgaaaaagtggatcattccgggtgatagattgggtagtgcattaagtgag
gagttactttttaataggagaaaaatctatattagggaaactaggaagatggaaagtaaa
actgttgctgatgttgtggaggcactaattggtgcatttcttagcattggtggtgaaaca
tcagcattattatttatggaatggttgggtataaaggtagattttcacataacaccatat
gagagacccttcccaattcatgcagagaagcgtctcaatgtcagacatttggagtcccta
ttgaactactcattccgtgatacttcgttgttagtggaagcattgacccatggtagcatg
tttcgcgagattccaagagattatgagcggcttgaatttcttggggactcagttttggat
tatctcatgaccaagcatttctactatgaatatcctgggttgtcaccagaacagttaact
gacatgagatctgcttctgtaaataatgaatgttatgcacgatctgcagttaagtttgga
ctacacaaacacatcctccgtgactcacaagaactcgacaagcagatagttaaaacttgt
aacaattttgagaagttatcatcagaatcaacttttggatgggatgccgagaccacattc
accgaggtacttggtgatattatagagtctcttgcaggtgccattcttgtagattctgga
tacaataaggagatggtctttggtagtataaggcctcttttagagcctctgatcacacct
gaaacgccaatgtctcatcctgtaaaggagttgactgaactatgccaaaagaagcattac
gaaatggaagagataaacaagaaccgcaacgacaatgagggtcttagttacattacagta
aaggtcaatgctaaaggtcacctattcgagcatacagctaaagctaccaatggaaaaaca
gcaaagaaattagcttataaagaagttttgaagtccttgaaggataaaaagttgaaagga
taa
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