Carya illinoinensis (pecan): 122274412
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Entry
122274412 CDS
T08745
Name
(RefSeq) F-box/LRR-repeat protein 4 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122274412
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122274412
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box_5
F-box-like
F-box
LRR_RPS2
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
122274412
NCBI-ProteinID:
XP_042939389
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Position
1:complement(41358073..41374883)
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AA seq
604 aa
AA seq
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MRGHDRINTCLPDELLVEIFRRLDSKPSRDACSLVCKRWLNLERLSRSTLRIGASGSPDH
FVKLITRCFVNVRTVHVDERLSLPAQLGRRFGSESFRPSPKLRYVKEKAGSEDSEFETSY
ISDAGLTVLGEGFSKLEKLSLIWCNNVSSMGLVSIAQKCRSLKSLDLQGCYVGDPGLAAV
GECCRQLEDLNLRFCEGLSDKGMVELALGCGKSLKSLGVAACAKITDISLEAVGSHCKSL
ETLSLDSEYISNKGLLAVAKGCPLLKVLKLHSVNVTDEALAAVGTGCSLLELLALYSLQR
FTDKGLQAIGNGCKKLKNLTLSDCYFLSDKGLEAIATGCKELTHLEVNGCHNIGTMGLES
IGKSCQQLTELALLFCQKIGNNALLEVGRGCKLLQALHLVDCSGIGDEGICGIARGCRKL
KKLHIRRCYEIGNKGIVAIGEYCKSLMDLSLRFCDRVGDEALVAIGQGCSLQHLNVSGCH
QIGDAGIIAIARGCPQLSYLDVSVLQNLGDMAMAELGEGCPLLKEILLSHCRQITDVGIS
HLVKNCTLLESCHMVYCPGITAAGVATMVSGCANMKKVLVEKWKVSQRTKRRAGPVISYL
CMDL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggccacgatcggatcaacacttgtctgcccgacgaactgctcgtagagatcttc
cggcgcctcgactccaagccgagccgcgacgcttgctccctcgtctgcaagcgctggctc
aacctcgagcgcctcagccgctccaccctccgtatcggagcctccggtagccctgatcat
ttcgtcaagctcatcactcgctgcttcgtcaatgtcaggaccgtccacgttgacgaaaga
ttatcgctccccgctcagcttggaagaagatttggcagtgaatcttttcgcccatctcca
aagctgcgttatgtgaaggagaaagctgggtctgaagacagtgagtttgagacgtcttac
atttcagatgctgggttgactgtcctcggggaaggcttttcaaagcttgagaaattgagc
ttaatttggtgcaataatgtgtcaagtatgggtttagtatctatagctcagaagtgtagg
tcgttgaagtctctggatttacagggttgttatgttggagatccaggtctagctgctgtt
ggagagtgctgtaggcaacttgaagacttgaatttgcgattttgtgaaggcttgagtgac
aagggcatggttgaattagcccttgggtgtggaaaatcattaaaatctcttggtgttgca
gcttgtgcaaaaataacggacatctcactggaagcagttgggtcgcactgcaaatctttg
gagaccctgtctttggattcagagtacataagcaataaagggttacttgctgtggccaag
ggatgtccccttttgaaagttctgaagctacacagtgttaatgttactgacgaggctttg
gcagccgttggcactggttgttcattgctggagttgctagctctatacagtttgcagaga
tttaccgataagggtctacaggcaattggaaatggttgtaagaagttaaaaaatcttacc
ctaagtgattgttatttcctgagtgacaagggcctggaagcaattgcaactggttgcaag
gaacttacgcatcttgaagttaatggctgccataatatcggaactatgggactggaatcc
attggaaaatcttgccaacaactcactgagttagcactgttattctgccagaagattggt
aacaatgcccttcttgaagttggaaggggctgtaagctcttgcaagctcttcacttggta
gattgttctggtattggagatgaaggtatttgcggtatagctaggggctgcaggaagttg
aagaaacttcacattcgtcgctgttatgagatcgggaacaagggaattgttgctattggc
gagtattgcaagtctctaatggatcttagccttcggttttgcgatagggtcggagatgag
gcccttgttgccatcggtcagggttgctcactgcagcatctaaatgtcagtggctgccac
caaattggagatgctgggataatagccattgcaagaggatgccctcaactcagttacctg
gatgtaagtgttctccagaacttgggggatatggcaatggctgaattaggagaaggctgt
ccgttactcaaagaaatactgctgtcacactgccgtcaaataactgatgttggtataagt
catctggtaaagaattgcaccctgcttgaatcctgccacatggtttattgccctggtata
accgcagctggagttgccaccatggtttctggttgcgccaacatgaagaaggttcttgta
gagaagtggaaggttagccagcggactaaacgaagagcaggccctgtcatctcttacctc
tgcatggacctttag
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