Carya illinoinensis (pecan): 122275061
Help
Entry
122275061 CDS
T08745
Name
(RefSeq) RHOMBOID-like protein 4
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cill01002
]
122275061
Enzymes [BR:
cill01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
122275061
Peptidases and inhibitors [BR:
cill01002
]
Serine peptidases
Family S54: Rhomboid family
122275061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
CcmH
DER1
DUF7374
DUF1751
Motif
Other DBs
NCBI-GeneID:
122275061
NCBI-ProteinID:
XP_042939935
LinkDB
All DBs
Position
9:complement(38591488..38594510)
Genome browser
AA seq
383 aa
AA seq
DB search
MEREPRPSQVQIRINSRRHSGVIHPLQSSPAPASAAASPGVNPVEIKHFKKWVPWLIPLF
VVANTIVFIIIMYVNNCPKNSVSCIAKFLGRFSFQPFKENPLLGPSSNTLQKMGGLDVSK
VVDKDQGWRLITSNWLHAGVFHLLANMLSLLLIGIRLEREFGFVRIGLIYVISGFGGSIF
SGLFIQSNISVGASGALFGLLGAMLSELITNWTLYSNKVAALLTLLVIIVLNLAVGILPH
VDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQRYTPAAADKPKFKMYQCILWVVSLILLII
GLTVGLVMLLRGVDANDHCSWCHYLSCVPTSSWSCNTQPASCSTIQTGNQLNITCSSNGK
SGVYILPNASNSQIQGLCVELCS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaaccgcgtccctcgcaagtccaaataaggatcaactccaggcgtcacagt
ggcgtgattcacccactacagtcatccccagctccggcatcagctgctgcaagcccgggc
gttaacccggtggagatcaagcatttcaagaaatgggtcccctggttgatacctttgttt
gtggtcgccaataccatcgtgtttataatcatcatgtacgtcaacaactgtcccaagaac
tctgtttcttgtattgctaagttcttgggtcgcttctctttccagcctttcaaggagaac
cctctgcttgggccttcctccaatacgctgcagaagatggggggtttagatgtgagtaaa
gtggtagacaaggaccagggatggcgcctcataactagcaattggttgcatgctggggtt
ttccatttattggcaaacatgctgagtcttttgttgattggaattcggcttgagcgtgaa
tttgggtttgtacggattgggttgatatacgtcatctctgggtttgggggcagtattttt
tctggccttttcatccagtcaaacatctctgttggtgcttctggtgcactttttggctta
cttggagcaatgctttctgaactcatcacgaattggacattatattccaataaggttgca
gcattactaaccctcctggtcatcattgtgctcaacttggcagtcggaatcctcccacac
gtggacaactttgctcatattggtgggttcctttcgggttttcttcttgggtttgtgttt
ttgatacgtccccaatttggatgggttagtcaaagatatactcctgctgctgcggataaa
cctaaattcaagatgtatcagtgcatattatgggttgtttctctgatccttttgattatt
gggctcactgttggcctggttatgctgctccgtggagttgatgcaaatgatcattgttct
tggtgtcattatttgagttgtgtcccaacttcaagctggagttgcaacactcagcctgca
tcttgctcgacaatccagacaggcaaccagttaaatataacgtgctcgagcaatgggaaa
tcaggtgtatatatattgccaaatgcatccaattcgcagatccaaggattgtgtgttgag
ctttgcagttga
DBGET
integrated database retrieval system
