Carya illinoinensis (pecan): 122275084
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Entry
122275084 CDS
T08745
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00061
Fatty acid biosynthesis
cill00071
Fatty acid degradation
cill01100
Metabolic pathways
cill01212
Fatty acid metabolism
cill04146
Peroxisome
Module
cill_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122275084
00071 Fatty acid degradation
122275084
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122275084
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cill01004
]
122275084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122275084
Enzymes [BR:
cill01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122275084
Lipid biosynthesis proteins [BR:
cill01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122275084
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of breast milk
122275084
Exosomal proteins of breast cancer cells
122275084
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122275084
NCBI-ProteinID:
XP_042939960
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Position
1:42228903..42241769
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AA seq
694 aa
AA seq
DB search
MDSTTAQRRLKAIHGHIVADGESHPQLHPNPTAAEFVMEEGYSVVLPEKLRSGKWNVYRS
ARSPLKLMSRFHDHPEIGTLHDNFVHSVDTFRDYKYLGTRIRVDGTIGEYKWMTYGEAGT
ARSAIGSGLIYHGIAKGSCIGLYFINRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIV
NHAALQVIFCVPQILHTLLSFLLDIPTVRLIVVVGGIDDQIPKLPSSTGVEVVTYSKLLS
QGRSNLQPFCSPKPDDVATICYTSGTTGTPKGAVLTHGNLIANVAGTSLCAKFYPSDVYI
SYLPLAHIYERVNMVSITYHGVAVGFYQGDNMKLMDDMAVLRPTIFCSVPRLYNRVYAGI
TNAVKTSGGLRQRLFNAAYNAKKQAILSGKNPSPMWDKLVFNKIREKLGGRVRFMVSGAS
PLSPDIMEFLKICFGGQVTEGYGMTETSCVISAIEEGDSLSGHVGAPNPACELKLVDVPE
MNYTSDDKPYPRGEICVRGPIVFQCYYKDEVQTKEVIDEDGWLHTGDIGLWLPGGRLKII
DRKKNIFKLAQGEYIAPEKIENVYAKCKFISQCFVYGDSLNSSLVAIVCVDQDVLKAWAA
SEGIKYQDLGELCNDPRTRASILADMDAVGREAQLRGFEFVKAVTLVLEPFTVENSLLTP
TFKIRRPQAQEYFGKAISIMYAELSTSDPSQKPL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggattccaccacagctcagcgtcgtctcaaagccattcacggccacattgttgctgac
ggcgagtctcacccccagctccatcccaatcccaccgctgcagagttcgttatggaggag
ggttacagtgttgtgcttcctgagaaattgcggtcagggaagtggaatgtatacagatct
gcacgttctcctttgaagctcatgagtagattccatgatcatcctgaaattggcacactt
cacgataattttgtgcactctgttgacactttccgagattacaaatatttgggaacacgg
attcgggttgacggcacgattggagagtacaaatggatgacatatggagaagcaggtact
gctcggtccgctataggttctggcctaatttatcatgggatagcaaagggatcttgcatt
gggttgtacttcatcaacagacctgaatggctcattgttgatcacgcttgctctgcatat
tctttcatatcggttcctttatatgacactcttggtccagatgcagtcaagtacattgta
aatcatgctgctctacaagttatattttgtgtgcctcaaatcttacatactttgttgagc
ttcttgttagatattccaacagttcgcctaattgtggtcgttggagggatagatgatcaa
attccaaagcttccatcatcaacaggagtagaggttgtgacgtattcaaaacttcttagt
caggggcgcagtaatcttcagcctttttgctctccaaaacctgatgatgttgctaccatt
tgctacacgagcggtacaactgggaccccaaagggagctgttttgacacatggaaacttg
attgcaaatgttgctgggacctccctttgtgccaaattctacccatcagatgtttacata
tcatatcttcctttggcacacatatatgaacgagtaaacatggtctcgattacctatcat
ggagttgctgttggattttatcagggggataatatgaaattaatggatgatatggctgtt
ctaagaccaactatcttctgcagtgtccctaggctgtataacagagtatatgctggtatt
acaaatgctgtaaagacatccggtgggctacgacagaggctatttaatgctgcatacaat
gctaagaagcaagcaatattgagtggaaagaacccttctcccatgtgggacaagttggta
ttcaataagataagggaaaagcttggaggacgagttcgttttatggtatcaggtgcctca
cccttgtctcctgatatcatggaatttttaaagatctgctttggtggtcaagtaactgaa
ggatatggcatgactgaaacttcttgtgtcataagtgccattgaggagggtgacagtcta
tctggccatgttggtgcccctaatccggcctgtgaactaaagcttgtggatgtcccagaa
atgaactacacatctgacgataagccgtatccccgtggtgaaatctgtgttaggggtcct
attgttttccaatgttattacaaagatgaagtgcagacgaaagaagtgattgatgaggat
ggatggcttcatactggagacatagggctgtggttacctggtggtcgtttaaaaattatt
gataggaagaaaaacattttcaagttggcacaaggagagtacattgctccagagaaaatt
gagaatgtatatgcaaagtgcaaattcatttcccagtgctttgtatatggtgatagcctg
aattcttctttggtagctattgtctgtgtggaccaagatgttttgaaagcatgggctgct
tctgaaggcattaagtatcaagatcttggagaactttgcaatgatccaagaacaagggct
tccatcttggctgacatggatgctgttgggagagaagctcagctgagaggttttgaattt
gtaaaagccgtgactttggtgcttgaaccgttcactgtggagaacagcctgcttactccg
acatttaagatcaggagacctcaagcacaggaatactttggaaaagcaatatctataatg
tacgcggaactctctacatcagacccctcccagaaaccattgtga
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