Carya illinoinensis (pecan): 122275341
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Entry
122275341 CDS
T08745
Name
(RefSeq) KH domain-containing protein At4g18375-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122275341
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122275341
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
122275341
NCBI-ProteinID:
XP_042940291
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Position
9:complement(14598503..14609816)
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AA seq
624 aa
AA seq
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MGETGKRSRFHKDRDGDNKNQKRRVNDKDDKGNDELVVYRILCPDGVIGSVIGKSGKVIN
SIRQETRAKVKVVDPYSGANDRVIIIYSYVREKEEVEVDDEFSDRKPLCAAQDALLKVHA
AIANAVASVGDSDKKRKDKEECQILVPSSQSANIIGKAGATIKKLRSKTRTNIKVTAKDA
TDPTHSCAMDFDNFVMISGEPEAVNKALFAISAIMYKFTPREEIPLDTSVPDASPSIIIP
SDIPIYPPGGLYQSADPVAPHRSVPPIVGATNVQDLQGYADTGNTWPLYSSALPVVSGFS
DASRTEELVVRVLCPFDKIGRVIGKGGGTIKSIRQASGAHVEVDDTKDDRDECIITITAT
ESPDDLKSMAVEAVLLLQGKINDEDDETVTIRLLVPSKVIGCIIGKSGSIINEIRKRTKA
DVRISKGDKPRCADANDELVEVLGEVGSVRDALVQIVLRLRDDVLKDRDGGRNHTVGADS
LFSAGTGLSVPSVLSSVPPVAPFGYDQRVESGSGLGMLSSSSLYGYGSLSMGENGYGSMP
SYSSKLYGGLPPPSTLEIMVPANAVGKVMGKGGANIANIRKISGAMIQISESKSSRGDRI
AHVSGTSEQKRAAENLIQAFILAT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagaccgggaagcgatctcgtttccataaggaccgtgatggggacaacaagaat
cagaagagacgggtgaacgacaaagatgacaaaggcaatgatgaactggttgtttataga
atactatgccctgatggggttattggaagtgtcattggtaagagtgggaaagtgataaat
tctataaggcaagagacacgggcaaaagtaaaggttgtggatccgtattcaggtgctaat
gaccgtgttataataatctacagctatgttagggagaaggaagaggttgaggtagatgat
gagtttagtgataggaaacctttatgtgctgctcaggatgctcttcttaaagttcatgct
gccattgcaaatgctgtggctagtgtgggagattctgacaagaagcgaaaggataaggag
gaatgtcagattcttgttccatctagccagtctgcaaatatcattggtaaggctggagcc
acaataaagaaactgagaagcaagacgaggacaaacattaaggtcacggccaaggatgcc
acggatccaactcactcatgtgcgatggactttgataattttgtcatgattagtggtgag
ccagaggccgtgaataaagcactgtttgccatttctgcaattatgtacaagttcactcct
agagaagagattcctctggacacgagtgtaccggatgcttctccaagcattatcatccca
tcagatatccctatttatccaccaggtggactatatcaaagtgcagatcctgttgcccct
catagatctgttcctccaatcgtaggtgctacaaatgtacaggatctccagggttatgcc
gatacagggaatacgtggcctctttattcatctgcccttcctgtggtgtctgggttcagt
gatgcctcacgaactgaggagttagttgtaagagtactgtgtccttttgacaagattggg
cgagtcattggcaaaggagggggtactattaaaagtataagacaggctagtggtgctcat
gttgaagttgatgataccaaggatgatcgtgatgagtgcatcatcacgattactgcaaca
gagtcacccgatgatctgaaatccatggcagttgaagctgttctattgttgcaaggaaag
atcaatgatgaagatgatgaaactgttactatcagactccttgttccatccaaggtcatt
gggtgtattattggaaaaagtgggtcaattataaatgaaatacgtaagagaactaaagct
gatgtccgtatctcaaagggtgataagcctaggtgtgctgatgcaaatgatgaacttgtt
gaggttcttggagaagttggcagtgttagagatgcacttgtccagattgttttaaggctc
cgtgatgatgtcctcaaagatagggatggtggtcgtaaccatactgttggtgcagattct
ctattctctgctggtactggactctcagttccatctgtcttgtcttctgttccccctgtt
gctccttttggatatgatcagagggttgaaagtggaagtggcttgggcatgctttcttca
agcagcctctatggatatggatctttgtcgatgggtgaaaatggctatggatccatgcct
tcatattcgtccaagctgtatggagggttgcctcccccttcaacgcttgagattatggtc
cctgctaatgcagtgggtaaagtgatgggcaaaggaggagcgaatatagccaacattcgg
aagatatcaggtgcaatgatacagatatctgaatccaaatcttcccggggtgatcgtatt
gcccatgtatcaggaacatctgaacagaagcgtgctgctgaaaacttgattcaggcattt
atactggccacctga
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