Carya illinoinensis (pecan): 122275408
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Entry
122275408 CDS
T08745
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122275408
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122275408
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122275408
NCBI-ProteinID:
XP_042940382
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Position
9:complement(30114528..30118326)
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AA seq
478 aa
AA seq
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MLPSTCIVLISLMCTFSRFGRAELNFTLPGQHPNPEAVVQEVHRRVNASVNRRSMLQLSQ
QDQSSCLTGNPIDDCWKCDPDWPNNRQRLADCAIGFGQYALGGKNGEFYIVTDSTDDDPV
NPRPGTLRYAVIQTEPLWIVFPSNMVIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQF
ISNIIIHNIHIHHCHPSGETNVRSSPTHYGWRTKSDGDGISIFGSKDIWIDHCSLSHCKD
GLIDAVEGSTGITISNNYFSHHDEVMLLGASDDYLPDSRMQVTIAFNHFGEKLVQRMPRC
RRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPSNHNAKEVTKRVDTAEGEWRGW
NWRSEGDIMVNGAFFVASGEGVEVKYEKAYSVEPKSAVLIDQLIMHAGVLGVGGRENNLG
MWSKGSEGGDSGFGSGPDYTDDFSGSGVLLSPSTSALVSPLIAFTCLLIYKVHQSFML
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaagcacctgcattgtcctgatctctcttatgtgcacattttctcggtttggt
agagcggagctcaacttcactcttccaggccagcatcccaaccccgaagctgttgtccaa
gaagttcacaggagggtaaatgcttctgtaaatagaaggagcatgctacaattatcccag
caagaccagtcttcatgcctaaccggaaaccccatagatgactgctggaaatgtgacccg
gactggcccaacaatcgacagagactagcagattgcgccattgggttcggacagtacgct
ctggggggcaagaatggagaattctatattgtcaccgactccacagacgatgatcctgtc
aatccaaggccagggactctacgttatgctgtgatccaaactgaacctttgtggatcgtg
ttccccagcaacatggtcataaaactctcccaggagctcatctttaatagctataaaact
ctcgacgggcgtggggctaatgttcacatcgtgggtggaggctgcattactcttcagttc
ataagcaatatcatcattcacaacatacatatccaccattgtcatccctcaggtgagact
aatgtgcggtcgagtccaacgcactacggttggcgcacaaaatccgacggtgatgggata
tcgatatttgggtcgaaagacatatggatagaccattgctccctttcgcactgcaaggac
ggcttgattgacgctgtggaggggtccactgggatcacgatatcgaacaactatttctcg
catcacgacgaggtgatgctgctgggcgccagcgacgactacttgcctgactccagaatg
caggtgactattgccttcaatcattttggtgagaagctggtgcagaggatgcccaggtgc
aggcgcggctatatccacgttgtcaacaacgatttcacgcagtgggagatgtatgccatt
ggtggtagcggtaaccccaccatcaatagccaaggcaaccgctacactgctccttccaac
cacaatgccaaagaggtaacgaagcgagttgacacagcggaaggggaatggaggggatgg
aattggaggtctgaaggggatataatggtgaatggagcattctttgtggcgtcgggtgag
ggggtagaggtcaagtacgagaaggcctatagcgttgagcccaaatctgctgttctcatt
gaccagctcatcatgcacgccggtgtactcggcgttggtggcagggagaacaatttggga
atgtggagcaaaggaagcgagggtggtgatagcggttttgggtcgggcccagactataca
gatgatttttcagggagtggcgtgttattgtcaccttctacctctgctctcgtatctcct
ttgattgcatttacgtgcttgttaatttataaagtacatcagtcatttatgttataa
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