Carya illinoinensis (pecan): 122275440
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Entry
122275440 CDS
T08745
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00500
Starch and sucrose metabolism
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
122275440
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cill01003
]
122275440
Enzymes [BR:
cill01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
122275440
Glycosyltransferases [BR:
cill01003
]
Polysaccharide
Storage polysaccharide
122275440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
PMEI
Motif
Other DBs
NCBI-GeneID:
122275440
NCBI-ProteinID:
XP_042940428
LinkDB
All DBs
Position
9:15913980..15932114
Genome browser
AA seq
1023 aa
AA seq
DB search
MSVKLSTWFVSEGIGGLSCKHSAVRFFLPRRSLPASCKMRQRNFSSQHKKQQLKKASHER
TSTNADFQANGDEESETENASIINVPILSQEIISTDDVDTGIAIEHINAEELSGPTVPDE
QKSLAINISGDKQLSGVQQEDLIGMIRYAEKNVILLNQARVSALEDLEKIVTEKETLQGE
INTLETKLAETDARIKVAAQEKIRLELLEDQLEKLQNELAHRDVSELSEIDMNENHHKLL
HHEGYVLDTSSVSSVSKELNSLREENISLKNDIEVLKTELSDVKNTDERVLILERERSLL
ESSLKDLESKLSVSQEDVSKLSTLKVEYKSLWQKVENLQVLLDKATKQADQAIIVLQQNQ
ELRKKVDKLEESLEEANVYKLSSEKLQQYNELMQQKIKVLEDRLQRSDEEINSCVQLYQE
SVKEFQDTLHSLKEQSKKRAADQYVDDMPLEFWSRLLLIIDGWLLEKKVSTNDANLLREM
VWNRDGQIYNAYMACKEKTEREAITTFLRLISSPTRPGLHIIHIAAEMAPVAKVGGLGDV
VSGLSKSLQKRGHFVEVVLPKYDCMQYDRIRDLRALDVMVESYFAGRLFKNKIWVGTVEG
LPVYLIEPHHPENFFWRGQFYGEHDDFKRFSFFSRAALELLLQAGKKPDIIHCHDWQTAF
VAPLYWDLYAPKGLNSARICFTCHNFEYQGTAPASELASCGLDVHQLNRPDRMQDNSAHD
RVNPVKGGIVFSNIVTTVSPTYAQEVRTAEGGRGLHSTLNSHSKKFIGILNGIDTDAWNP
ATDTFLKVQYTANDLQGKAENKEAMRRLLQLSSADIKKPLVILFYQMVGCITRLVPQKGV
HLIRHAIYRTLELGGQFILLGSSPVPHIQREFEGIANHFQNHDHIRLILKYDEFLSHSIY
AASDMFIIPSIFEPCGLTQMIAMRFGSIPIARKTGGLNDSVFDIDDDTIPLEFRNGFTFL
TPDEQGVNNALERAFNLYKNNPDIWKQFVQKDMNIDFSWDSSAAHYEELYSKSVARARAA
IQT
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaagttatcgacgtggtttgtgagcgaggggatcggcggattgagctgcaag
cactcggctgtgcgctttttcttacctcgtcgctcacttcctgcttcctgcaaaatgcgt
cagcgtaattttagttcccagcataaaaaacaacaattgaagaaagcctctcatgaacgg
acttcaacaaatgcagatttccaggcaaatggtgacgaggagtctgaaaccgaaaatgct
tcaattattaatgttccaattttgagccaggaaattatatctactgatgatgttgacact
ggcatagctatagagcatatcaatgcagaggagttgagtggcccgactgtacccgatgaa
caaaaatctttggctataaacataagtggtgacaagcaactttcgggtgttcaacaagag
gacttaattggcatgataagatatgcagaaaaaaatgtcattcttttaaatcaagcccga
gtgagtgcacttgaagatcttgaaaagattgtcactgagaaggagacactgcaaggagag
atcaatactttggagacgaaactggcagaaactgatgcccggattaaagttgctgcccaa
gaaaagatacgtctggaactcctggaagaccagttagagaagctgcagaatgaactggct
cacagggatgttagtgagttaagtgagattgatatgaatgagaatcatcacaaacttttg
catcatgaaggctacgtactagatactagtagtgttagttctgttagcaaggagcttaac
tcattgagggaagagaatatctccctcaagaatgatatagaagtactcaagactgagctt
agtgatgtcaagaacacagatgagcgcgtgcttatactggaaagagaacgctcattgctg
gagtcttccttgaaagacttggagtctaaactctctgtttctcaggaagatgtttccaaa
ctttccactctgaaagttgaatacaagagcttgtggcagaaggtagaaaatctacaggta
ttgttagataaggcaacaaaacaggcagatcaagctattatagtattgcagcaaaaccaa
gagctccggaagaaggttgataaactggaagaatcccttgaagaagctaatgtctataag
ctctcatcagaaaaattgcaacaatataatgaactaatgcaacaaaaaatcaaagtgttg
gaggaccgtcttcaaaggtctgatgaagagattaattcctgtgtacaattatatcaagaa
tcagtgaaggaatttcaagatacacttcatagtttgaaagaacagagcaagaaaagggca
gcagatcaatatgtggatgacatgcctttggaattttggagccgcttattgcttataatt
gatggttggttgcttgagaaaaaagtatcaaccaatgatgcaaatttattgagagaaatg
gtatggaacagagatggacaaatttacaatgcgtacatggcatgcaaggaaaagactgaa
cgggaggctataactacgtttctcaggctgatatcatcaccaacacgtccaggattacat
atcattcatattgcagcagagatggcaccggttgctaaggtgggtggtttgggggatgtt
gtaagtggtcttagcaaatctttacagaaaaggggacactttgtggaagttgttcttcca
aaatatgactgcatgcaatatgatcgaattcgtgacttaagggccctagatgtgatggta
gaatcatactttgccggccggctattcaaaaataaaatctgggtcggcactgttgaaggt
cttccagtttatttaattgagcctcatcatcctgaaaatttcttctggagaggacaattt
tatggcgagcatgatgatttcaaacgtttttctttttttagccgtgcagcgcttgagtta
cttcttcaagctggcaagaaaccagacataattcattgccatgattggcagacagctttt
gttgctccactttattgggatttatatgcccctaaaggattgaactcagctagaatatgt
tttacatgccacaactttgagtaccaagggactgctcctgcttcagaattggcatcctgt
ggtctcgatgtccatcagctaaatagaccagatagaatgcaagataactctgcacatgat
agggtcaatcctgttaagggtggaattgtgttttccaatattgtgacaacagtatcacct
acttatgcacaagaggtgcggactgctgagggaggaagaggtcttcattcaacccttaat
tctcactccaaaaagttcattggaattctaaacggaattgatactgatgcatggaatcct
gccactgatacatttctcaaagtccagtacactgcaaatgatcttcaagggaaagcagaa
aataaggaagctatgcgaaggcttctacagctttcttcagcagatatcaagaagccactg
gtaattttgttttaccaaatggtaggctgcataacaagattggttccacagaaaggtgta
catcttattagacatgcaatatatcgaacattggagttgggaggacagtttatacttctt
ggttcaagcccagtcccacatattcagagagaatttgagggtattgcaaaccattttcag
aatcatgatcacattcggttgatattgaagtatgatgagtttctttcccattccatatat
gcagcttctgatatgttcatcatcccatctatctttgagccatgtggccttacacagatg
atagccatgagatttggttctataccaattgcaagaaaaacgggtggtctgaatgacagt
gttttcgacattgatgacgatacaattcctctcgaatttcgaaacggatttacatttttg
acacctgatgaacagggtgtaaacaatgctttggaacgtgcatttaacctctacaaaaat
aaccctgacatttggaagcagtttgttcagaaggacatgaatatagattttagttgggac
tcttcggcagcacactatgaggaactctactcaaagtctgttgcaagagcaagggctgca
attcagacttaa
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