Carya illinoinensis (pecan): 122275459
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Entry
122275459 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122275459 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122275459
Membrane trafficking [BR:
cill04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122275459
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
122275459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
WD40
TFIIIC_delta
Synaptobrevin
Lgl_C
Beta-prop_TEP1_C
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
122275459
NCBI-ProteinID:
XP_042940460
LinkDB
All DBs
Position
9:complement(41987318..41999673)
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AA seq
1113 aa
AA seq
DB search
MFAKRLLQKAVNHHQRKAHHDGLTSADLDARIAIHYGVPSTASVLGFDPIQRLLAIGTLD
GRIKVIGGDGIEGLLISPKQLPYKNIEFLQNQGYLVSISNDNDIQVWNLESRRIVGCLQW
TSNITAFSVISGSYFMYVGDEYGLMSVIKFDAEDEKLLQLPYHISANSISEVAGFPFPSD
QPIVGVLPQPSSSGNRVLIAYQHGLIILWDVSEGQILFVGGGKDLQLKDGVVDSSSNEVI
TNLPDDTLDDHLGEKEISALCWASSDGSILAVGYVDGDILFWKISRTASIKGQQAISSPN
SIVKLQLSSAERKLPVIVIQWSKNQRSRNDCDGHLFIYGGDEIGSEEVLTVVTLEWSSGT
LRCVGRADLTLPGSFADMLLLSNAGAMGRNQKADLFVLTNPGQLHFYDDASLSALVSQQE
RRPSISAMKFPAVVPISNPLMTVAKLSKFPTGGDSSKALLEAASVRKLASTETLVSGARW
PLTGGVASQSSITKDNGLQRVYLAGYSDGSIGIWDATYPVLSFICLIEGEVQGIKVAGSS
DPVTKLDFCSSNLSLAVGNESGLVRLYDLKGRSDGTNFHFVTETKNEVHILPQGKGLKCR
AVFFLLSSSVQALHFANCGSKLAVGFECGRIAVLDTSSLSVLFWKDGLSSSPIISITWKE
LRYTDGIVKSPKHSEMKIPPNPAAEVMFVLTKDAKINVIDSGTGNTINTRPWNLKKESVA
ISMYVIAVSMSVSETSNETQPESHEDIPMKNEPMPDGTTVRVNSLEGEPHSSATASSEER
LLDSVLLLCCEDSLHLYSTKSVIQGNNKAIRKVKHAKCCCWTTTLKKEEKFCGLVLLFQT
GVIEIRSLPDLELVKESSLMSILRWNFKANMDKAMSSSDNGQITLASGCELAFVSLLATE
NDFRIPESLPCLHDKVIAAAADAALSFSSTQKKKQIIQPRILGGIIKGLKGVKMVHSEDI
TIPPNFNFTQLEAIFSKSPFSDPCPVVTDNQEELELNIDDIEIDEPIPTASTSSHDSMNI
KTEQGTERERLFQGGTDDTKPRIRTPEEIVATYRKAGDASSVAAHAKDKLLLRQEKLERI
SRRTAELQSGAEDFASLANELVKTMEARKWWHI
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgaagcgattgttacagaaggcggtgaaccatcatcagcggaaagcacatcat
gatggtttgacatcagcagacttggatgctcgaattgctatccattatggtgtcccgtcc
acagcatcggttcttggtttcgacccgattcagcgccttttggccattgggactctggat
gggcgaattaaagttattggtggagatggtattgaaggacttcttatatctccgaagcaa
ttgccttacaagaacatagagtttctacaaaaccagggttatttagtcagcatttcaaat
gacaatgatattcaggtttggaatctcgagagcaggcgtatagttggttgtttgcagtgg
acatccaatataactgctttttccgtgatcagtggctcctactttatgtatgttggtgat
gagtatggtttgatgtctgtcattaagtttgatgccgaagatgaaaaacttttacagttg
ccgtatcacatctctgcaaattctataagtgaagtcgctgggtttccctttcctagtgac
caacctattgttggagttcttcctcaaccctcttcttctgggaatagagtattgattgca
tatcagcatgggttgattattctttgggatgtttctgaaggtcaaattctctttgttgga
ggtggtaaggatctccaattgaaggatggagttgttgattcttcttcaaatgaagtgatt
acaaatcttccagatgatacattggatgatcatttaggagaaaaggagataagtgctctt
tgttgggcatcttccgatgggtccattctggctgtgggatacgttgatggagatatatta
ttttggaaaatatcgcgtactgcatcaattaaaggtcaacaagctatatcatcaccaaac
agtattgtgaagctacaattatcatctgcagaaaggaaactccctgtcatcgtcatacag
tggtccaaaaaccaaagatcccgtaatgattgtgatggccatctttttatatatggtggt
gatgaaataggatctgaagaagttttgacggttgtaactcttgaatggtcatccgggacg
ttaagatgtgttggtcgtgcagaccttacacttcctggctcttttgcagacatgctttta
ttgtcaaatgctggggcgatggggcgtaaccagaaagctgatctttttgtgttgacaaac
cctgggcagctacatttctatgatgatgctagtctatctgccttagtctcacagcaagag
agaagaccatccatctctgccatgaagtttcctgcagtggtaccgatatctaatcctctc
atgacagttgcaaagctaagtaaattccccactggaggggactcctcaaaggctctgttg
gaggcagcttcggttaggaaacttgcctcgacagagaccctggttagtggtgcacggtgg
cccttgaccggaggtgtagccagtcaatcgtctattactaaagataatggtcttcagaga
gtgtatttagcaggttattctgatgggtccattgggatatgggatgccacatatccagtc
ttatcttttatctgtcttatagaaggcgaggtgcaaggtataaaagtggctggttcaagt
gacccagtgacaaagttggacttctgctcctccaatttaagtttggctgttggcaatgaa
agtggtctggttcgtctctatgacctcaaaggccgttcagatgggacaaacttccacttt
gtcactgagactaaaaatgaagttcacattttgcctcaaggaaaaggacttaaatgtaga
gctgttttctttcttcttagttcctcagtgcaagcactacattttgcaaattgtgggtct
aaacttgctgtaggatttgaatgtggtcgtattgcagtgcttgacacaagttcattatca
gttttgttctggaaagatggtctttctagctctccaatcatttcaataacttggaaagaa
ctgagatatactgatgggattgtcaaaagcccaaagcactccgaaatgaaaatcccaccc
aaccctgcagcagaagtaatgtttgtcttaacaaaggatgcgaagattaatgtgattgac
agtggtactggtaacactatcaacactcggccatggaacttgaaaaaggaatcagttgcg
atttcaatgtatgttatagcggtcagtatgtccgtctctgaaacctctaatgaaacacag
ccggagtcccatgaggatattcccatgaagaatgaacccatgcccgatggtactacagtt
cgagtaaattcacttgagggtgaaccacactcttcagcaactgcatcctctgaggaaaga
ttgttggattcggttcttttgctttgttgtgaggattccttgcacttgtactctacaaaa
tctgtgattcagggaaataataaagccattagaaaggtgaaacatgcaaaatgttgctgt
tggacaacaactttaaagaaagaggaaaaattttgtggactggtcttgctgtttcagaca
ggagtgattgaaataagatctttgccagatttggaattggtgaaagaaagctccttgatg
tcaattttaaggtggaattttaaggcaaacatggacaaggcaatgagttcttctgataat
gggcaaattacactggcaagtggctgtgaattggcgtttgtctctttattagctactgaa
aatgatttcaggattccagaatcattaccttgtctccacgataaagttattgcagctgct
gcagatgctgcccttagtttctcttcaactcagaagaaaaagcagattatccaacctaga
attcttggtggtatcatcaagggtcttaaaggggtgaaaatggtccattctgaggatatc
accatacctcctaactttaatttcactcaattggaggccatattttcaaagtcaccattc
tcagacccatgtccagttgttacagataatcaggaagaactggagcttaacatagatgac
atcgaaatagatgaacctatacccacggcttctacttcatcccatgattctatgaatata
aagacagagcaggggacagagagggaaagactatttcaaggtggaactgatgatacaaaa
cccagaattagaacccctgaagaaattgttgctacatacagaaaagctggggatgcttct
tcggtggctgcacatgcaaaagataagctcctactgcggcaggaaaaattggagagaatc
agcagacgcacagcagagctacaaagtggagctgaagactttgcatcattggcaaatgag
cttgtaaagaccatggaggctcgaaaatggtggcatatatga
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