Carya illinoinensis (pecan): 122275512
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Entry
122275512 CDS
T08745
Name
(RefSeq) phytochrome E-like isoform X1
KO
K12123
phytochrome E
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
122275512
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_3
Motif
Other DBs
NCBI-GeneID:
122275512
NCBI-ProteinID:
XP_042940543
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All DBs
Position
9:15963579..15969207
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AA seq
1193 aa
AA seq
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MNSDVGEDKPKPQDEKDVRKLRVQESSSRSGKYSYNKHPATFTTPMSTSVSEKNPSTGAL
KMGLGTRETGSPTLLSSGESNVMSPEDKTGTTTPNKDTRDKEIAQYNADARIMAEFEKSS
GSGKSFDYSRSVLHAPQSVSEEQITAYLSRIQRGGLIQPFGCLLAIEEPTFRIIAYSENC
LELLSLDSQFESKEFKGLLGIDARTLFTPSSGALLAKAASSREISLLNPVWVYSTSIQKP
FYAILHRIDVGIVIDLEPALSDDPALSLVGAVQSQKLAIRAISRLQSVPGGNIGALFDTV
VEDVQKLTGYDRVMVYKFHDDDHGEVVSEIRRSDLEPYLGLHYPAIDIPQAARFLFKQNR
VRIICDCHANPVSIIQSEELKQPLCLVNSTLRAPHGCHVQYMANMGSNASLVMAVIINAN
DSLKLWGLVVGHHTSSRYVPFPIRYACEFLMLAFGLQLCMELQLASQLAEKKIIRTQTLL
CDMLLRDVPFGVVTRSPSIMDLVKCDGAALLYDGRCWLLGVTPTEAQVKDIAEWLLTNHG
DSTGLSTDSLADAGYPGAALLGDEVCGMTSARITSKDFLFWFRSHTAKEVIWGGAKHQPD
SKDDGQKIHPRLSFKAFLEVVKSRSMLWEVSEINAIHSLQIIMRDSFQDMEDRASKVLKK
IQQSDTGMPGIYELSSAAYEMGRLIETATVPIFGVDSDGLINGWNGKIAELIGLQASEAM
GKSLVSEVVHEDSRGTVENILCRALQGEEDRNIELKLKNFGGDQHKSVVYIVANACRSKD
YINNIVGVCFVGQDVTSEKVLMDKFIRMQGDYESIIQSLNPMIPPIFASDENACCSEWNA
AMEKLTGWRRDEVMGKMLLGEIFGSFCWLKGQDSLTKFMIFLYRGISGHDTEKLPFEFFD
KDGKFVEVVVTANKRTNAGGHVIGCFCFLQIVMPELEQALEGCWQEDRECFSKLGLAYVL
QEMKNPLNGIRFTHRLLENTAVSEHQKQFLDTSDACERQIMTIVEDMDFESTEEGSLQLN
MEEFLLGNVLDAIVSQVMILLRERNLRLFHEIPEDVKALYLYGDQIRLQLVLSNFLLNVV
RFASSPSGWVEITVSPGLKLIQDCNERIRLQFRMTHPGQGLPSALIQDTFEGGNQWTTQE
GFGLSLSRKLLNRMNGQVRYVREHNKCYFLIDIELKTKKEREKTSQADKTRMT
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagatgtaggagaagataaacccaaaccgcaagatgaaaaagacgtgcggaag
ctacgagtacaagaatcaagcagcagaagcggcaagtacagctacaataaacatccagct
actttcactactcccatgtctacttcagtttccgagaaaaacccatcaaccggagccctt
aaaatggggctgggaaccagagaaacaggctcaccgacattattatcttcaggtgagagc
aacgtcatgagtcctgaagacaagaccggcaccaccacccccaacaaggacacgagggac
aaggaaattgctcagtacaatgctgatgccaggatcatggctgagtttgagaagtccagt
ggttcgggtaagtcttttgactactcaagatcagtactgcatgctccacaatctgtgtct
gaagaacaaataactgcatatctgtccagaatacaaagaggtggtctaattcagcccttt
ggatgcttgcttgcaattgaggaacccacttttagaatcatcgcttatagtgagaattgc
ttggaactgctgtctttagacagccaattcgagtcaaaagaatttaagggtttgcttgga
attgatgctagaaccttgtttacgccttcttcaggggctttattggcgaaagctgcctcg
tctagggagatttcgctattaaaccctgtttgggtctactctacaagtatccaaaagcca
ttttatgccatactacatagaattgatgtggggattgtgattgatttggagcccgcactg
tcggatgatcctgcattgtcccttgtgggggcggtgcaatcacagaaactggctattcgg
gcgatttctagactgcagtcagtccctgggggaaatattggtgcactgtttgatacagtt
gtggaggatgttcagaagctcactgggtatgacagggttatggtttataagttccatgat
gacgatcatggggaagttgtatctgaaatcagaagatcagatttggaaccctacttgggt
ttacattatcctgccatagatatccctcaagccgctcgcttcttattcaagcagaatcga
gtgcgaataatttgtgattgccatgcaaatcccgtaagcatcattcaaagtgaagaacta
aagcagcctctttgtttggtcaactcaacacttcgggcaccacatggatgccacgtgcag
tacatggcgaatatgggctccaatgcctcattggtgatggcagttattatcaatgctaac
gattcgttaaagctttgggggttggtggtaggccaccacacttcctcacgctatgtacct
ttccccattcgctatgcatgcgagttccttatgctggcatttggacttcagctatgcatg
gagcttcaactggcatcacaattggcagagaagaaaattatcaggacacaaaccttatta
tgtgacatgctcctccgggatgtcccatttggtgtcgtcactcgatctcctagtatcatg
gatcttgttaagtgtgatggggctgcattgctttatgatgggagatgttggttgttgggt
gtgactccaactgaagcacaggtgaaagatattgcagagtggctgcttactaatcatgga
gattccacgggactgagtacggatagtttggctgatgctggttaccctggtgccgcttta
cttggtgatgaagtttgtggcatgacttctgcaagaatcacttcaaaggatttcttgttc
tggtttaggtctcacactgcaaaggaagtaatatggggaggagccaagcatcaaccggat
agtaaagatgatggccaaaaaatacacccaagattgtcatttaaagcttttcttgaagta
gtaaaaagtagaagtatgctttgggaggtttcggaaattaatgcaattcattctctacaa
attattatgagagactcattccaggatatggaggaccgtgcttctaaggtattgaaaaaa
attcagcagagtgatactggtatgccggggatatatgaactcagttcagcagcatatgaa
atgggtagattgattgagacagctacagttcctatttttggggttgattcggatggtctc
ataaatggatggaatggaaaaattgctgaattaataggattgcaagctagcgaagccatg
gggaagtccctggttagtgaagttgttcatgaggactcgcgtggaactgttgagaatatt
ctatgcagagcattgcaaggtgaggaggacagaaacattgaattaaaactgaaaaacttt
ggtggtgatcagcataagtcagttgtatacattgtggccaatgcctgcagaagtaaggat
tacataaacaacatagtcggtgtgtgctttgtgggccaagatgttacatctgagaaagtt
cttatggataaattcatccgcatgcaaggggattatgagtctatcatacaaagcctgaat
ccaatgattccacctatatttgcttctgatgagaatgcctgctgctctgaatggaatgca
gccatggaaaagctaactggttggaggagagatgaagtcatgggtaaaatgcttcttggg
gaaatctttggaagtttctgttggctgaaaggtcaagattcactaactaagtttatgatt
tttttgtatcgaggaattagtggtcatgatactgagaagctcccttttgagttttttgat
aaagatggaaaatttgtggaggtagtcgtaacagcaaacaagaggaccaatgcaggtggg
catgtaattggctgtttctgcttcttgcagattgttatgcctgaactggaacaggcttta
gaaggatgctggcaagaggatagggaatgcttttcaaaattggggttggcttatgtcctg
caagaaatgaaaaatcctctgaatggtattcgctttacacacagactcctcgaaaataca
gctgtttcagaacatcaaaagcaatttcttgacactagtgatgcatgtgaaagacagatc
atgacaattgttgaggatatggatttcgaaagtacagaggaaggtagcctgcagctaaac
atggaagaatttctcttgggaaatgttttggatgccattgtcagtcaagtcatgatcttg
ctaagagaaaggaacttaaggctttttcatgagattccagaagatgtcaaagcactatat
ctgtatggtgatcaaatcaggcttcaactggtcttgtcaaacttcttgcttaatgtggtg
cgtttcgcatcttctccttctggctgggtggaaattacagtttcacctggtctgaagctt
atacaggattgcaatgaacgtattcgtttacaattcagaatgacacaccctgggcaaggt
cttccttctgctcttatccaagatacgtttgaaggcggaaaccagtggacaacacaggaa
ggctttgggctcagcctgtctcggaaacttctcaacaggatgaatggtcaggtccgctat
gttagagagcataataaatgctatttcctcattgacattgaacttaaaacgaagaaagaa
agggaaaaaacttcacaggcagataaaaccaggatgacttga
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