Carya illinoinensis (pecan): 122275522
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Entry
122275522 CDS
T08745
Name
(RefSeq) protein FRIGIDA-ESSENTIAL 1 isoform X1
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122275522
Transcription factors [BR:
cill03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
122275522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_4
L_lac_phage_MSP
Motif
Other DBs
NCBI-GeneID:
122275522
NCBI-ProteinID:
XP_042940557
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Position
9:complement(6511977..6518801)
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AA seq
795 aa
AA seq
DB search
MHPSDSHATRSDEDEDYEDPVEASDSDIVTDGQEEPEYEEVEEQEAEEYGNGNVEKEEDV
VEEVEVDREDELDLSNSPIQADKDPNDVSQDVKFEGHGEILKPGSPALEKYGVKISSDTL
TVEESRGNFHFSRPSNEPSTTQKEESGLSYEKSKYIKSRKVLVPKERASKYQSAAHHESN
GYLCNKDSIDAKTNFLSSITGNVMVDAILMKEHLGEEANGVMNTNEERKQLDLQSGHGKK
RLESRFSRLASPDTRIRSLSPDAEIKDGNKRPAVICDFFAQGWCVRGSSCRFLHIKDALH
NTAQKPEADASTLNWKKVQVDEGLRDIAERSRSPGFPEPQASSVGKCLEFSSQLSSERSR
SPVFVSYKDVGRDGERHNWPADNYGDHASSNSRVSSIVTNGSLPDYRFSSSGSVLLSSNY
RSGVFPSHSSSMAEMGSIWSQHIHSDLNSPHKIHSLNLSSNSSFLSTSMLLSHRISSWRA
SSSPFSHSSSLLRSSSPFYDSKSENLPITNVRLKSTEHKTKFSSNDWEPSVPFQPSFFIP
PIGTPSQGRQYDPLLDSIELPRIGDQSFGVSVCGHGVSIMDASRLRKYDDSVLTGMLGPE
CNDETTSVSSHNKFHENVLEKDSRERVSLTTEAETVGTSAVDCQNGTMPKEENPLGPSRV
KDMTKMSNEDHGSSHQNDVSMHQEDLKVSRARPDNEMDVRNKIDGNTHRESRAGRHFRAA
LIDLVKELLKPNWRDGHLNKDAHNMIVKKVVDKVLRALQSHQVPTTLESVKQYLSSSRPK
IAKLVEGYVDKYGKS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcatccctcggactcccacgccacgcgctccgacgaagacgaggactacgaagatcct
gtagaagcttcagattctgatatcgtgaccgacgggcaagaagaaccggagtatgaagaa
gtggaagaacaagaggcggaagaatacggaaatgggaacgttgaaaaagaagaagacgta
gtagaggaggtggaggtggatagggaggacgagttggatttgtcaaattcgccaattcaa
gccgataaggatcccaacgatgttagtcaagatgtgaagtttgaggggcatggcgagata
ctaaaaccaggttctcccgctctagaaaaatatggagtgaagatatcatctgacaccctt
acagttgaagaaagtcgtggtaatttccatttttctcgtccttcaaatgagccatcaaca
acacaaaaagaggaatcaggcttaagctatgagaaatcaaagtatataaaatcaaggaaa
gttctggttccaaaagagagagcgtctaaatatcaaagtgctgcacatcatgaaagcaac
ggatatttgtgcaataaggacagtatcgatgctaaaaccaactttctttctagcatcact
ggaaatgtgatggttgatgccatcttgatgaaagaacacttaggtgaggaggccaatggt
gtcatgaataccaatgaagaaagaaagcaattggacttgcaatcaggacatggcaaaaag
agattggaatcaaggttttccagattggcctctcctgatacaaggattagaagtctgtcc
cctgatgctgagattaaagatggaaacaaacgcccagcggttatttgtgacttttttgca
caagggtggtgtgtcagaggtagttcatgtaggtttcttcatataaaagatgctttgcat
aatactgctcaaaagcccgaggcagatgcatctactttgaattggaaaaaagttcaggtt
gatgaaggtttgagagacattgcagagagatcgaggtcccctggttttcctgagccacag
gcatcttcagttggaaagtgtctggaattttcttcacagttgtcttcagaaagatcaagg
tcccccgtctttgtctcgtataaggatgtaggtagagatggtgagaggcataactggcct
gctgataattatggtgaccatgcttcatctaacagtagagtcagttctatagtaacgaac
ggctcacttcctgactataggttttcttcaagtggctctgttctgttgtctagcaattac
cgcagtggggtcttcccttctcattcaagcagtatggctgaaatgggtagtatttggagc
caacatatacacagtgacttgaattcaccacataagatccattctctgaatttgagctca
aatagttcttttctgagtactagcatgttgctatctcaccgtatctcttcctggagagca
tcttcatcaccatttagtcattcctcttccttgcttcgtagttcttctcccttctatgat
tctaaatcagaaaatctacctataaccaatgtacggctgaaatctactgaacataaaaca
aagttttcttcaaatgattgggagccttcagtacctttccagccatccttttttattcct
cctattggtacaccatctcaaggacgccaatatgatcctcttcttgatagtattgagtta
cccaggataggagatcaatcctttggagtctctgtttgtggtcatggggtgtccatcatg
gatgcatcacgtttgaggaaatatgatgattctgtattaactggtatgctgggcccggaa
tgcaacgatgagacaacttcagtatcttctcataataaatttcatgagaatgtgttggaa
aaagactctcgtgaaagagtttctcttacaactgaagcagagacagtaggaacttctgct
gttgactgccaaaatgggacaatgcctaaagaagagaatcccttgggcccctcccgtgtc
aaagatatgacaaaaatgagtaacgaggatcatggttctagtcatcaaaatgatgtgtca
atgcatcaagaggacttaaaagtaagtagggccagaccagacaacgaaatggatgtcagg
aataagattgatggaaatacgcacagagaatcaagagcagggagacatttccgtgctgct
cttatagatttagtgaaagagttgttgaaaccaaattggcgtgatggccatctcaacaag
gatgcacataacatgatagttaaaaaagtcgttgacaaggttcttagagccttacagtcc
catcaagttccaaccaccttggaatcagtgaagcaatatctctcttcatcccgtccaaaa
attgcaaaacttgttgagggatatgttgacaaatatggcaaatcttaa
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