Carya illinoinensis (pecan): 122275582
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Entry
122275582 CDS
T08745
Name
(RefSeq) transcription factor WER-like
KO
K09422
transcription factor MYB, plant
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122275582
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122275582
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
122275582
NCBI-ProteinID:
XP_042940633
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Position
9:24149778..24152976
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AA seq
262 aa
AA seq
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MTELVKFPDWEKMPLRKGAWSPEEDKKLKTYIKRYGIWNWSRMSKPAGLARSGKSCRLRW
VNYLRPDIKRGNFSEQDDETILKWHEVLGNRWSAIAAKLPGRTDNEIKNYWHTHLKRRLK
NSSLSTTVPQTVVDVNKNNSSGIQDLLLCDAPKVSNLDDTRDIIPMSRQLSTDDLSSSST
DPAVEIDRKQPIEENFGSSKTSEELQTSWEQTLSFREQDIFMPETDPGFVCPTTAVWLQD
PLYHPYSSYNEFLVDLSMHAEM
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacagagttggtgaagtttccggattgggagaaaatgcctttgagaaaaggcgcatgg
agtcctgaagaagataagaagctgaaaacttacattaagcgatacggcatttggaattgg
agtcggatgtcgaaacctgctggtttggctaggtctgggaagagttgcaggctccgttgg
gtgaattacttaaggcctgatattaagcgtggaaacttcagcgagcaagacgatgaaact
atactcaagtggcatgaagtgctgggaaaccgatggtctgctattgctgcaaagcttccc
ggaagaactgacaatgaaattaaaaattactggcacacgcacttgaaaagacgcctcaag
aatagttccttatcaacaactgtaccacaaacagttgttgatgttaacaagaataattca
tctgggattcaagatcttttactttgtgatgcccctaaagtttcaaacttggatgacact
agagatattataccgatgtcacgacagctgtcaacagatgatctatcatcttcaagcact
gaccccgctgttgaaatcgatagaaaacaaccgatagaggagaattttggttcatctaaa
acatctgaagagctccaaacttcatgggagcagacactatcatttcgggagcaggacata
ttcatgccagagacagatcctggatttgtctgtccaactactgcagtgtggctccaagac
cccttatatcatccatatagttcctataatgagtttttggtcgatttatcaatgcatgca
gagatgtaa
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