Carya illinoinensis (pecan): 122275607
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Entry
122275607 CDS
T08745
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122275607
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
90S particles
Other 90S particles
122275607
Pre-60S particles
Other pre-60S particles
122275607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
122275607
NCBI-ProteinID:
XP_042940664
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All DBs
Position
9:3911933..3922032
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AA seq
1202 aa
AA seq
DB search
MKKPTETPSTMPGRERNQELQDQQEEQSELFNGGSDFCQQLVDRYAKSSAPQHRHLIATA
VAMRSILASESLPMIPSAYFAAAIDSASSNSRTLDPTAIAALLSFLSMVVPLVPPKGIAA
PKASEAVGVLVGLVGKEREELAMASVRAVVKCLGVLLGFCDLQDWHSINLGFETLLNLAV
DRRPKVRRCAQDYLEKVFTSFRCLAVVKEASKLVMSLLKNHMPLAIKLSSLRPVDGSKDE
ISSEPEHLEVLYVLNVVKISVPHLSAKITSKVMSEVCKLVRSDFSLLTRHVFKIIEAIFE
TSRVEFGVPETDNIVDSLASYVSLGDRNPLDTVVSAATLLKRSLDVLHDGEPSSWTRSLP
LVCESLAGLLNSEASTASQTSSILKDLLSHHVDPKSFSTPKDKQFDNECQESMEASAMKS
ICAIFENALSAIDGVPNEHILGVISVLFLKLGERSFVFMKNIVLKLADLILHGGGTSYTN
HLQNCIGSAVIAMGPERILTLLPISLHTDDSTCMNLWLVPILKDYVVGASLRYYMEHIVP
LAKSFERASRKAKKLAISTDKKKLAISQDLLAHAHDLWGLLPGFCRYPTDTYQNIGPLAE
ILIPLLKKDSFMHENIAIALQVLVSQNNSVLSSRRDADQSNLFAVKDFVVEIGNIPTYSE
KTATRNIRALKSCSTELLEALTDLFVDSHPEKRSYLKDAIGCLASITDSSSIKKILMSLF
ERFQFIDGEGEFEKYNQVLIDKEQGNLSSTEKDVQRCVMMELASSFVGGAKEDLIDLIYK
FIKHTFQATDETGHREAYHTMSRILEEHAWFSSSRFIELSSLLLDLKSPVDIASIRDRFA
CFHVLMVHTLKMSLEEENTRAFLFLNEIILTLKEGKEEARKAAYDVLLMISSSLRDSPSV
SDPPYNKLISMIMGYLSGSSPHIKSGAVSALSGLVYKDADICLSMPDLVPSILSLLHSKA
VEVIKAVLGFVKVLVSCLEANGLRNLLSEIVNEVLRWSSVSRHHFREKVTVIMEIMLRKC
GSAAVGSVTPEKYKSFLKTVVENRHNKTNSKESGTGDTEMMPAYSSTKASDSMPDKRRHK
KWAYPSKENDSGEQRKAKREKKNNSRTPGSNKGHWSNGSSSGLRSTNRDMHSDNAKSIKG
QSEGRLKKSQSGYSAGPTIGKKRKQMELTNMKKDKARVPTHSGASKSRKHQNLGRKRLKI
NK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaccgaccgaaaccccaagcaccatgccgggacgagagcgcaatcaggagctt
caagaccaacaagaagaacaatcggagctgtttaatggtggctctgacttttgccaacag
ctcgtggaccgctacgccaagtcctccgctccgcagcaccgccacctcatcgccactgcc
gttgccatgcgctcgatcctggcctccgagtccctccccatgatcccatccgcctacttc
gctgccgccatcgattctgcgtcatccaattcccggaccttggaccccaccgccatcgcc
gcgctgttgtcgtttttgtcgatggtggtaccgctggtgccgccgaaggggattgcagct
ccaaaggcgagcgaggcggtgggcgtgctggtaggattggttgggaaggagcgggaggag
ctggccatggctagtgtgagagccgtcgtgaagtgtttgggggttttgttagggttttgt
gatttgcaggattggcattctatcaacttagggtttgaaacgctgttgaatctcgcggtc
gatcggcgtccaaaggttaggagatgcgctcaagattatcttgagaaggtttttacgtct
ttcaggtgtttggctgttgtcaaggaagcgagcaagttggtaatgtctttacttaaaaat
cacatgcccttggcaatcaaattaagtagtttgagacctgtagatgggtcaaaagatgaa
atatcgtctgaacccgaacatctggaggtcctttatgtgttaaatgtagtgaagattagt
gttccccatctctcggcaaaaatcacttcaaaagtaatgtcagaagtgtgtaaacttgtg
aggtcggacttctcactgcttacaaggcacgtttttaaaattattgaagcaatttttgaa
acatctagagttgaatttggtgttccggagacggacaacattgtggattcccttgcttct
tacgtgtctttgggagataggaaccccttggacactgttgtatctgcagcaaccttgtta
aaacgttctctggatgtacttcatgatggagaaccaagctcgtggacaagaagtcttcct
cttgtttgtgaatctttagcaggtcttctaaattccgaggctagcacagcatcacagact
tcaagtatcttgaaagacttgctcagtcaccacgtggatcctaaatctttctcgactccc
aaagataaacaatttgacaatgaatgtcaggagagcatggaagctagtgcaatgaaatca
atatgtgctatctttgagaatgcccttagtgctattgatggtgttccaaatgagcatatt
ttaggcgtcatatctgttttgtttctcaagcttggagagaggtcatttgtttttatgaag
aatatagtgcttaaacttgctgacttgattcttcatggtgggggcacatcctacactaac
catcttcagaactgtattggatctgctgtaattgccatgggaccagagaggatacttaca
cttttacctatctcccttcacactgatgactccacttgtatgaacctttggttggtacct
attttaaaagattatgtcgttggagcatcattgaggtactatatggagcatattgtgcct
cttgcaaaatcttttgagcgggctagtcgtaaagctaagaagttagcaatcagtactgat
aaaaagaagttagcaatcagtcaagatctgctggcacatgcgcatgacctctggggacta
ctccctggattttgtcgttatccaactgatacttaccaaaatattggacctttggctgag
atattaattcctttactaaagaaggactcattcatgcatgaaaatattgccattgcatta
caggttcttgtgtctcaaaacaacagtgttcttagctctagaagagatgccgatcaatca
aatttgtttgcagtaaaagactttgttgtggagattgggaatatacccacttattcagag
aagacagcaaccagaaacatcagggccttgaaatcgtgttcaacagagttgctcgaggct
ctaacagacttatttgttgattcacatcctgagaagcgctcatatctaaaggatgccatt
ggatgcttggcttctattacagattcttcatcaataaaaaagattctcatgtcattattc
gagagatttcagttcatagatggtgagggagaatttgaaaagtataaccaagtgttgatt
gataaagaacaaggcaatctaagtagtaccgagaaagatgttcagaggtgtgtaatgatg
gagctagcatcgtcttttgttggaggagccaaagaggatcttattgatcttatctataaa
tttattaagcatacttttcaggcaactgatgagactgggcatcgtgaagcatatcatacc
atgagcagaattctagaggaacatgcttggttttcttcatctcgatttattgagctgagt
tctctgttactcgatctcaagtctcctgttgatattgcatctattagagatcgctttgca
tgtttccacgttcttatggttcacacgctgaagatgagcctggaggaggagaatacaagg
gcttttctttttctgaacgagattatactcaccttaaaggaaggcaaggaagaagctaga
aaagctgcttatgatgtacttcttatgataagttccagtttaagagactcaccatctgtt
tctgatccaccctataataagctgattagcatgataatgggctatctttctggttcatcc
cctcatataaagagtggagcagtgtctgccttgtcaggattggtatataaggacgccgat
atatgtctttccatgcctgacctggtaccatctattttatcgttgctgcatagcaaagct
gtggaagttataaaggctgttttgggttttgtgaaagtgctagtctcctgcttagaagcc
aatggcctgcggaatcttctttctgaaattgtcaatgaagttctccgatggtcatctgtc
tccagacatcactttagagaaaaggtcactgtcataatggagataatgttacggaagtgt
ggttctgcagcagtggggtcagtgacgccagagaaatataagagttttcttaagactgtt
gttgagaaccgccataacaaaacaaattccaaagaatctggcactggtgatacggaaatg
atgcctgcatattcatctactaaggcttctgattccatgccagataaaaggagacacaaa
aaatgggcttatccatccaaggaaaatgattcaggagaacaaaggaaggctaagagggag
aagaaaaataattcccgcacccctggctcaaacaaaggccactggtctaatggtagtagt
agcggtttaagatcaactaacagagatatgcattctgataatgcaaaatcaataaagggt
cagtcagaagggagactaaaaaagagccagagtggttacagcgctggtccaacaatcggt
aaaaagagaaaacagatggagttgacaaacatgaagaaagataaagccagagttcctaca
cattctggtgcttccaaatcacgcaaacaccagaatttagggaggaaaagattgaaaatc
aacaaatga
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