Carya illinoinensis (pecan): 122275663
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Entry
122275663 CDS
T08745
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00906
Carotenoid biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122275663
Enzymes [BR:
cill01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
122275663
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GIDA
Thi4
HI0933_like
Pyr_redox_2
GDI
FAD_binding_3
DUF7640
MCRA
Motif
Other DBs
NCBI-GeneID:
122275663
NCBI-ProteinID:
XP_042940746
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Position
9:2498712..2503768
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AA seq
717 aa
AA seq
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MTLSHSLPLPEFMSSSLPGNHNTPILNRPSPTKLGFIRPTNPKQKFNFFVSQKVKPIGFF
GCNLCDSNSGFNSCQIFDECYAAQSSGIGPSSRKHKVFSIKRANTRALSDRQLFGLASGL
YSSRQLGTSRLTSSGCKILSGGALRIPNTKSFKHGSGISGACEVNWSNQKFELRSKSVLS
IDRAVEREGSGGGPGRENSYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGY
YQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMQVIPDPSTVHFHLPNNLSVRVH
RKYSEFIAELTDKFPHEKEGILEFYGECWKIFNALNSLELKSLEEPIYLFGQFFQKPLEC
LTLAYYLPQNAGDIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGI
NYPVGGVGGIAKSLAKGLIDQGSEILYKANVTSIILEQGKAVGARLSDGREYFAKTIISN
ATRWDTFGNLLKGERLPKEEENFQKVYVKAPSFLSIHMGVKAEALPPDMDCHHFVLENDW
KKLEEPYGSIFLSIPTVLDSSLAPEGRHILHIFTTSAMEDWEGLPRKDYEAKKEIVADEI
IRRLEKKLFPGLRSSIVFMEVGTPKTHRRYLARDKGTYGPMPRGTPKGLLGMPFNTTGVG
SLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGLEKKSPILDAALLRLLGWLRTLA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaccctctcccactcacttcccttgcctgaatttatgtcttcttctttacctggcaac
cacaatacccctattctcaatcgccctagtcccacaaaattgggttttataagacccaca
aacccaaaacaaaaattcaacttcttcgtttctcaaaaagtaaaacctattggtttcttt
gggtgcaatctctgcgactctaattctgggtttaacagttgtcaaatttttgatgagtgt
tatgctgcacaatcaagtgggatcggacccagtagtagaaaacacaaggtcttctctatt
aaacgtgctaacactcgagctctcagtgatcgccagctctttggcttggcttcagggttg
tacagctccagacagttgggcacttccagacttacaagttcaggatgcaaaattctgtct
ggtggtgccctgagaattccaaatacaaaaagtttcaagcatggtagtgggatttcagga
gcttgcgaggtgaattggagcaatcagaaatttgaattgaggtccaaatcggtgcttagt
atagatagagcggtagagagagagggaagtggaggggggccgggtcgggagaattcttat
gatgccattgttatcgggtctgggattggaggattagttgcggcgacgcagttggcggtg
aagggtgctagggttctggttttggagaagtatgtcattcctggtggtagctctggatat
taccagagggatgggtatacttttgatgttgggtcctctgtgatgtttggtttcagcgac
aagggcaatctaaatctgataacccaagcattggcagcagttggatgtgagatgcaagtg
atacctgatccaagtactgtacatttccatttacccaataacctttctgtccgagtgcat
agaaaatatagcgaattcattgcagaacttactgataaatttccccatgaaaaagaaggg
atcctcgagttctacggtgaatgttggaagattttcaacgctctgaactccttggaattg
aagtcacttgaggagccaatctacctttttgggcagttcttccagaagccccttgaatgc
ttgacactcgcctattatttgccacaaaatgctggagacatagctcgaaaatacattaaa
gatccccagttgttgtctttcatagatgcagagtgtttcatagtgagcacagtcaacgct
ttgcagacaccaatgatcaatgctagcatggttctttgtgacaggcattttggtgggatt
aactaccctgttggtggtgttggggggattgctaagtccttggcaaaaggcctgattgat
cagggcagtgaaatactttacaaggcaaatgttactagcattatacttgagcagggaaaa
gctgtgggagctaggctgtcagatggaagggagtactttgccaaaaccataatatcaaat
gctactagatgggatacttttggaaatctcttaaaaggagaacgcctccctaaggaagaa
gagaattttcagaaagtttatgttaaagctccatcttttctttctattcatatgggggtt
aaagctgaggcactgcctccagatatggattgccaccattttgtgcttgagaatgattgg
aaaaaattagaggagccatatggaagcatatttttaagcattccaaccgtccttgattca
tcattggctccagaaggacggcacattcttcatatttttaccacttctgccatggaggac
tgggagggtcttcctagaaaagactatgaggctaagaaggaaattgtagcagatgaaatc
atcaggagattagagaagaaactatttccagggctgagatcatcaattgtttttatggag
gtaggaacaccaaagacacacaggcggtacctggctcgtgataaaggtacctatggacca
atgccgcgtggcactcccaagggactactcggaatgccattcaataccacaggtgtaggt
agtctttactgtgtcggtgatagctgctttccaggacaaggtgttatagctgtagccttt
tcaggagtaatgtgtgcacaccgagtagctgctgatcttgggctcgagaagaagtcacca
atattagatgctgccctccttcgacttcttggttggttaaggacgttggcatga
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