KEGG   Carya illinoinensis (pecan): 122275823
Entry
122275823         CDS       T08745                                 
Name
(RefSeq) protein CIA1-like
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cill03036]
    122275823
   03400 DNA repair and recombination proteins [BR:cill03400]
    122275823
Chromosome and associated proteins [BR:cill03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122275823
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122275823
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_DCAF12 NBCH_WD40 Beta-prop_ELP1_1st Beta-prop_HPS5 B-prop_COPA_B_2nd DUF4082
Other DBs
NCBI-GeneID: 122275823
NCBI-ProteinID: XP_042941033
LinkDB
Position
9:complement(1520632..1525367)
AA seq 354 aa
MELYEGGCDLKLLETLEGHSDRVWSLAWNPATGASGTPLVFASCSGDKTVRIWEHTPSPS
ATWTCKAILEDTHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDYECVSTLEGHENE
VKSVSWNASGTLLATCGRDKSVWIWEMQPGNEFECVSVLQGHTQDVKMVQWHPSTDVLFS
CSYDNTIKVWADDDDDWQCVQTLGEPNNGHSSTVWALTFNASGDKMVTCSDDLTLKIWET
DNVQMHSGDGYAPWRHLCTLTGYHDRTIFSVHWSSGGIIASGAADDAIRFFVGNKDGLAD
GPSYKLLLKKEKAHDMDINSVQWSPGEKRLLASVSDDGVIKIWELVSLSTGNGY
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggagttgtacgagggagggtgcgacctgaagctgctcgaaacgctcgaaggccacagc
gacagggtatggagcctggcgtggaatccagccactggcgcctctgggactcctctcgtt
ttcgcctcctgtagcggcgacaagaccgtcagaatctgggagcacactccctctccctct
gctacttggacctgcaaggcaattctggaagacacgcatactaggaccgtccgatcttgt
gcttggtcgccgtcggggaagctattggccaccgcgagctttgatgccaccactgccatt
tgggaaaacgttggtggtgattacgaatgtgtctccactttagagggtcatgagaatgaa
gtgaaaagcgtttcatggaatgcatcgggaacgttgcttgcaacgtgtggccgagataaa
tcggtttggatttgggaaatgcagcctggcaacgagttcgagtgtgtttcggtgttgcag
ggacacactcaagatgttaagatggttcagtggcatccgagtacggatgttttgttctcc
tgtagctacgataacaccattaaggtttgggcggatgatgatgatgattggcaatgtgtt
cagactttaggtgaacctaacaatggtcactcttctaccgtatgggcactcactttcaat
gctagcggagacaaaatggtcacatgtagtgatgatcttaccctgaagatatgggaaaca
gacaacgtacagatgcactctggtgatggttatgctccttggagacatctctgcactctc
actggttatcatgatcgaacaattttctcagttcattggtcaagcgggggtattattgca
agtggagcagctgatgatgccatacgattttttgtggggaacaaagacggtttggctgat
ggaccttcatataaattgctgctgaagaaggagaaggcccatgacatggatataaactca
gtgcaatggagccctggggagaaacgactattagcttccgtgagtgatgatggtgtgata
aagatatgggagctggtttcattaagtacaggaaacggctactag

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