Carya illinoinensis (pecan): 122275826
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Entry
122275826 CDS
T08745
Name
(RefSeq) LOW QUALITY PROTEIN: BTB/POZ and MATH domain-containing protein 4-like
KO
K10523
speckle-type POZ protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122275826
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122275826
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
TRAF-mep_MATH
BACK
MATH
BACK_BTBD8
Motif
Other DBs
NCBI-GeneID:
122275826
NCBI-ProteinID:
XP_042941037
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Position
9:complement(28724862..28733459)
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AA seq
440 aa
AA seq
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MLSSSPSSPRLGSPSSSRSVTETVNGSHNFTIKGYSLAKGIGVGKHIASDNFTVGGYQWA
IYFYPDGKNPEDNSTYVSVFIALASEGTDVRALFELTLLDQSGAGKHKVHSHFDRSLESG
PYTLKYRGSMWGYKRFFRRNMLESSVFLKDDCLKINCTVGVVVSAIDCSRLHSIHVPESD
IGAHFGMLLENEECSDVTFTVSGEKFHAHKLVLAARSPVFETDFFDGMDEDNPEIVITDM
EPKVFKALLHYIYRDTLVEDEDFLASTSSCTPSLSDTFAAKLLAASEKYALPRLRLMCES
VLCRDITVDSVANILALADRYHASDLKSVCLKFAAENLVAVMRSDGFEYLKENCPLLQSE
LLKTVAGCEEEFSGGGKSRSVWAQFSDGGDTNDRSVRQQTWENEGKRRRRLWGQLSDGDD
GMMLVVGVVDKKTDIVSIVT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcttcgtccccctccagcccccgcctggggtcccccagcagttcccggtccgta
acggagaccgttaacgggtcccacaacttcacgatcaaaggttactcgttggctaaaggg
atcggcgtcggcaagcacatcgccagcgacaacttcaccgtgggaggctaccagtgggcc
atctatttctacccggacggcaagaaccccgaggacaattccacctacgtctccgtcttc
atcgctctcgccagcgagggaaccgacgttcgagccctcttcgagctcactcttctcgat
cagagtggcgccggcaagcacaaggtccatagccattttgatcgctccctcgagagtggg
ccatacaccctcaagtatagaggcagcatgtggggctacaaacgatttttcagacggaat
atgcttgaatcatcagttttcctgaaggatgattgcttgaaaataaattgtactgttggt
gttgtggtttctgctatagattgttcaagactacactccatacatgtccctgaatctgat
attggagcacattttggtatgttattggagaacgaggaatgttcagatgttactttcact
gtgtctggggaaaagtttcatgctcacaagcttgtgctggctgctcgttctcctgtgttt
gaaactgatttttttgacggaatggatgaagataatcctgaaatagtcattacagatatg
gaacccaaggtttttaaggccttgcttcactacatctacagagatacccttgttgaagat
gaggatttcttggcatcaacttcatcttgcacgccatctttatctgacacatttgcagca
aaactgttagctgcatcggaaaaatatgctttgcctagacttcggctgatgtgcgagtct
gtactctgtagagatataactgtagattctgttgccaatattttggcccttgctgaccgc
tatcatgcttcagatctaaaatcggtttgcctaaaatttgcggctgaaaaccttgttgcc
gttatgcggtcggatggtttcgagtatctgaaagagaactgcccattgctgcagtccgag
ctcctaaagacagtggcaggatgcgaggaggaattcagtggagggggtaagagtcgaagt
gtgtgggctcagttttctgatggaggcgacacgaacgataggagtgtaaggcaacaaacc
tgggaaaatgagggtaaaagaagaagaagattgtggggccagctttctgatggtgatgat
ggcatgatgcttgtggtaggagttgtagacaagaagactgatattgttagcattgttacc
tag
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