Carya illinoinensis (pecan): 122275883
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Entry
122275883 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122275883
04121 Ubiquitin system [BR:
cill04121
]
122275883
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122275883
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122275883
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122275883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
Prok-RING_4
CxC4
Rad50_zn_hook
zf-HC5HC2H_2
FAR1_N
zf_RING_Vps8
DUF1272
Ribosomal_aS21
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
122275883
NCBI-ProteinID:
XP_042941125
LinkDB
All DBs
Position
9
Genome browser
AA seq
374 aa
AA seq
DB search
MASMGSSYWCYRCNRFILVRVRANDTFLCPDCGGGFVEEIRTPTRSPLHRFPAASVYIDD
PPIPEHNAIPRLQRSRRNGGDRSPFNPVIVLRGPADGGGRNEPERGNFELYYDDGAGSGL
RPLPTSMSEFLMGSGFDRLLDQLAQLEVNGVGRLEHPPASKAAIESMPIIKIVASHVSTE
SHCAVCKEQFELDSEAREMPCKHIYHSDCILPWLSMRNSCPVCRHELPTDVRASGSGRNS
PEPDGARDEEAVGLTIWRLPGGGFAVGRFTGGIRAAERELPVVYTEVDGGFNTGGVPRRI
SWETSVRSSRETGGLRRAFRSFLSFFGRLRPASSSSRSSSEPGLTRRRSGSNAVFNRSWR
RRGGHPVALDDPTR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgatgggctcctcctactggtgctacagatgcaaccgattcatactggttcgg
gtccgtgccaatgacaccttcctctgccccgactgcggtggtggatttgtcgaagaaatc
cggaccccgactcgatctccgctccaccggttccccgctgcctcagtatacatcgatgac
ccgcccattcccgaacacaacgccattccgagactccagcgcagccgtaggaatggtggg
gatcgctcgcctttcaaccccgtcatcgtcctccgtgggcctgcagatggaggcggccga
aatgaacccgaaagagggaattttgagctctattacgacgatggagctggttcggggctc
cggcctctacccactagcatgtcggagttcttgatgggctccggattcgaccgccttctc
gaccaattggcgcagttggaggtaaatggagtcgggcggttagagcacccacccgcgtca
aaggctgctattgaatcgatgcctattatcaagatcgtcgcgagccacgtttcgacggag
tcgcattgcgcggtctgtaaggaacaattcgagctcgattcggaggcacgggagatgcct
tgtaagcacatttaccattcggattgtatactaccgtggctctccatgaggaattcttgt
ccggtgtgtcggcacgagttgcccacggatgtgcgtgcgagtgggagcggtaggaattca
ccggagcctgatggagctcgagacgaagaggccgtgggattgacgatttggagacttcct
ggtggtgggtttgcggttggtaggtttactgggggaataagagccgcggagcgtgagcta
cctgtcgtttacacggaggtagatggtgggttcaacactggtggtgttcccagaaggatt
tcgtgggagacgagtgtgagaagctcaagggaaaccggtggactgcgacgtgcgtttcgt
agcttcttatcatttttcggtcggcttagacctgcttcatcatcctctcgttcgagttct
gaaccggggctaactcgtaggaggagtggctctaatgcggtgtttaatcgttcgtggagg
aggcgcggcggccatcctgtggctttggatgatcccactcggtga
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