Carya illinoinensis (pecan): 122275891
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Entry
122275891 CDS
T08745
Name
(RefSeq) farnesyl pyrophosphate synthase 1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122275891
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122275891
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122275891
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122275891
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122275891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
DUF5438
Motif
Other DBs
NCBI-GeneID:
122275891
NCBI-ProteinID:
XP_042941141
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All DBs
Position
9:12545162..12549421
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AA seq
342 aa
AA seq
DB search
MADLKSTFLKVYSTLKSELLEDPAFEWTDESRQWVERMLDYNVPGGKLNRGLSVIDSYKL
LKEGKELTEDEIFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGLIAAN
DGILLRNHVPRILRNHFRNKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYTL
SLHRRIVQYKTAYYSFYLSVACALVMSGENLDKHIDVKNILVEMGVYFQVQDDYLDCFGD
PETIGKIGTDIEDFKCSWLVVKALELSNEEQKKVLYENYGKPDPANVTKVKALYKELDLQ
VVFAEYESKSYQKLTASIEAHPSKAVQSVLKSFLGKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctgaagtcaacctttctgaaagtatactccaccctgaaatcggagctcctt
gaagatcctgctttcgagtggaccgatgaatctcggcaatgggtcgagcggatgctggat
tacaatgtgcctggagggaagttgaacaggggcttgtccgttattgacagctacaaattg
ttgaaagaaggaaaggaattaactgaagatgaaattttccttgctagtgctcttggttgg
tgtattgaatggcttcaggcatattttcttgttcttgatgacatcatggataactcccac
acgcggcgtggtcaaccttgctggttcagagtgccaaaggttggtttgattgctgcaaat
gatgggattctacttcgaaaccatgtccctaggattcttaggaaccacttcagaaataag
ccttactatgtagatttgcttgacttgtttaacgaggtggagtttcaaaccgcttcagga
cagatgatagatctgattactactcttgaaggagaaaaagatctgtccaaatacacattg
tcacttcaccgccgtattgttcagtacaagacagcctattactcattttacctttcggtt
gcatgtgcattggttatgtcgggtgagaatctagacaaacatattgatgtgaagaatatt
cttgttgagatgggggtctactttcaagtacaggatgattatttggattgctttggtgat
cctgaaacaattggcaagataggaacagacattgaagattttaagtgctcctggttggtg
gtaaaagcattggagctaagcaatgaagaacaaaagaaagtgttatatgagaactatggg
aaacctgacccagccaatgtcacgaaagttaaggccctctacaaagagcttgatcttcag
gtcgtttttgctgagtatgagagtaagagctatcagaagttaacggcctctattgaagct
catccaagcaaagctgtgcaatcagtgttgaagtcattcttgggtaaaatatataagagg
caaaaataa
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